RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 LRRC39Q96DD0 335 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 CNOT6LQ96LI5 555 aaKnown RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 CHST12Q9NRB3 414 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 ASS1P00966 412 aaKnown RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 ZNF284Q2VY69 593 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 MYCBPQ99417 103 aaPredicted RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 FAM96AQ9H5X1 160 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 SH3GLB1Q9Y371 365 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 CLASP2O75122 1294 aaKnown RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 SASH1O94885 1247 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 CLTBP09497 229 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 STIP1P31948 543 aaKnown RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 PCSK7Q16549 785 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 UNC45BQ8IWX7 931 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 MCEMP1Q8IX19 187 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 RCOR2Q8IZ40 523 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 EEF2KMTQ96G04 330 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 CAMKK2Q96RR4 588 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 TESK2Q96S53 571 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 INTS10Q9NVR2 710 aaKnown RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 CALB1P05937 261 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 P4HBP07237 508 aaKnown RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 RAB14P61106 215 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 PID1Q7Z2X4 250 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 DDI1Q8WTU0 396 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 C17orf80Q9BSJ5 609 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 BRIP1Q9BX63 1249 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 KIAA1586Q9HCI6 787 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 TRIM10Q9UDY6 481 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 PCSK1NQ9UHG2 260 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 R3HDM1Q15032 1099 aaKnown RBP13.27□□□□□ -0.28
TCF4-248ENST00000616053 C6orf118Q5T5N4 469 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 TMEM270Q6UE05 265 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 MTERF3Q96E29 417 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 MROH2BQ7Z745 1585 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 E9PBE3 544 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 TXNP10599 105 aaKnown RBP13.27□□□□□ -0.28
TCF4-248ENST00000616053 CPA1P15085 419 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 CRKLP46109 303 aaKnown RBP13.27□□□□□ -0.28
TCF4-248ENST00000616053 SPP2Q13103 211 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 ZCCHC8Q6NZY4 707 aaKnown RBP13.27□□□□□ -0.28
TCF4-248ENST00000616053 WDR60Q8WVS4 1066 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 A0A0G2JND7 137 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 MBL2P11226 248 aaPredicted RBP13.27□□□□□ -0.28
TCF4-248ENST00000616053 ARF5P84085 180 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 ELOAQ14241 798 aaKnown RBP13.27□□□□□ -0.28
TCF4-248ENST00000616053 SYNE4Q8N205 404 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 ANKRD13CQ8N6S4 541 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 TUFT1Q9NNX1 390 aa13.27□□□□□ -0.28
TCF4-248ENST00000616053 SBNO1A3KN83 1393 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 EVPLLA8MZ36 301 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 TBC1D4O60343 1298 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 TADA3O75528 432 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 MMRN1Q13201 1228 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 SNCBQ16143 134 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 FEM1BQ9UK73 627 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 SATB2Q9UPW6 733 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 ANKRD36BQ8N2N9 1353 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 H7C4K7 107 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 CLK3P49761 638 aaKnown RBP13.27□□□□□ -0.29
TCF4-248ENST00000616053 LPIN1Q14693 890 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 MAPRE2Q15555 327 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 PEG10Q86TG7 708 aaKnown RBP13.27□□□□□ -0.29
TCF4-248ENST00000616053 FANCBQ8NB91 859 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 AGR3Q8TD06 166 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 TFB1MQ8WVM0 346 aaKnown RBP13.27□□□□□ -0.29
TCF4-248ENST00000616053 NOS1P29475 1434 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 GH2P01242 217 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 AMD1P17707 334 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 LRRC41Q15345 812 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 FAM83BQ5T0W9 1011 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 NLRP14Q86W24 1093 aa13.27□□□□□ -0.29
TCF4-248ENST00000616053 MAGED4Q96JG8 741 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 RNF146Q9NTX7 359 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 CNPP09543 421 aaKnown RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 MYBL2P10244 700 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 MAPKAPK2P49137 400 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 BNC1Q01954 994 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 CCNG2Q16589 344 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 CDK20Q8IZL9 346 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 SYT2Q8N9I0 419 aaPredicted RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 C8orf58Q8NAV2 365 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 CAPS2Q9BXY5 557 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 IMPACTQ9P2X3 320 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 ASAP1Q9ULH1 1129 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 TRIM13O60858 407 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 ETFBP38117 255 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 ZMYND11Q15326 602 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 RGS9BPQ6ZS82 235 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 CLEC4FQ8N1N0 589 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 PADI4Q9UM07 663 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 PDZK1P1A8MUH7 402 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 TAF4O00268 1085 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 MARSP56192 900 aaKnown RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 KCNV1Q6PIU1 500 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 DEFB128Q7Z7B8 93 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms