RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 A0A087WZ62 844 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 A0A0U1RQF3 1178 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 LGALS16A8MUM7 142 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 TEX33O43247 280 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 CALUO43852 315 aaPredicted RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 STBD1O95210 358 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 PSMC5P62195 406 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 CCZ1BP86790 482 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 CCZ1P86791 482 aaPredicted RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 UBXN1Q04323 297 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 SMC1AQ14683 1233 aaKnown RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 DNTTIP2Q5QJE6 756 aaKnown RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 FKBP15Q5T1M5 1219 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 TWF2Q6IBS0 349 aaKnown RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 FOXR2Q6PJQ5 311 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 FAM43BQ6ZT52 329 aaPredicted RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 APTXQ7Z2E3 356 aaKnown RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 ZBTB33Q86T24 672 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 RHPN2Q8IUC4 686 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 NELFCDQ8IXH7 590 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 FEZF2Q8TBJ5 459 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 NLRP4Q96MN2 994 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 CEP89Q96ST8 783 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 FDXACB1Q9BRP7 624 aaPredicted RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 GBP3Q9H0R5 595 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 MRPL44Q9H9J2 332 aaKnown RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 NGRNQ9NPE2 291 aaKnown RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 HCFC2Q9Y5Z7 792 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 CACNA1HO95180 2353 aa11.72□□□□□ -0.53
COL4A1-205ENST00000615732 ZFHX2Q9C0A1 2572 aaPredicted RBP11.72□□□□□ -0.53
COL4A1-205ENST00000615732 VPS13AQ96RL7 3174 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 C2orf71A6NGG8 1288 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 AKR1B15C9JRZ8 316 aaPredicted RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 H0Y858 1186 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 B4GALT3O60512 393 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 GCNT3O95395 438 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 PHKA2P46019 1235 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 NPEPPSP55786 919 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 BCAR1P56945 870 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 KRT17Q04695 432 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 TBX2Q13207 712 aaPredicted RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 CCDC40Q4G0X9 1142 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 XKR3Q5GH77 459 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 RARS2Q5T160 578 aaKnown RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 C1orf186Q6ZWK4 172 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 MYCT1Q8N699 235 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 C12orf76Q8N812 135 aaPredicted RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 KREMEN2Q8NCW0 462 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 GLIS3Q8NEA6 775 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 CASP10Q92851 521 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 ATOH1Q92858 354 aaPredicted RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 RIPOR3Q96MK2 946 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 CEP63Q96MT8 703 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 TUBGCP2Q9BSJ2 902 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 MRPL9Q9BYD2 267 aaKnown RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 GCOM2Q9BZD3 368 aaPredicted RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 SMOC2Q9H3U7 446 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 POMKQ9H5K3 350 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 PARVGQ9HBI0 331 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 SUCLA2Q9P2R7 463 aaPredicted RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 SEL1LQ9UBV2 794 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 DBR1Q9UK59 544 aaKnown RBP11.71□□□□□ -0.53
COL4A1-205ENST00000615732 ODF2LQ9ULJ1 636 aa11.71□□□□□ -0.53
COL4A1-205ENST00000615732 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
COL4A1-205ENST00000615732 UBE4BO95155 1302 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 LRRC10BA6NIK2 292 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 C2CD4DB7Z1M9 353 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 CCP110O43303 1012 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 CLASP2O75122 1294 aaKnown RBP11.7□□□□□ -0.54
COL4A1-205ENST00000615732 LYPLA2O95372 231 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 GNA14O95837 355 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 GUCY2CP25092 1073 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 PBX1P40424 430 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 DNM2P50570 870 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
COL4A1-205ENST00000615732 MTMR3Q13615 1198 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 ANO5Q75V66 913 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 CATSPER4Q7RTX7 472 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 IRF2BP1Q8IU81 584 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 C4orf19Q8IY42 314 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 VPS52Q8N1B4 723 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 SCFD1Q8WVM8 642 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 TMEM169Q96HH4 297 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 PCMTD1Q96MG8 357 aaPredicted RBP11.7□□□□□ -0.54
COL4A1-205ENST00000615732 TIPINQ9BVW5 301 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 NIFKQ9BYG3 293 aaKnown RBP11.7□□□□□ -0.54
COL4A1-205ENST00000615732 ZBP1Q9H171 429 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 SPTLC3Q9NUV7 552 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 TBC1D13Q9NVG8 400 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 WRAP73Q9P2S5 460 aaPredicted RBP11.7□□□□□ -0.54
COL4A1-205ENST00000615732 DNAJB4Q9UDY4 337 aa11.7□□□□□ -0.54
COL4A1-205ENST00000615732 IGKV6-21A0A0C4DH24 114 aa11.69□□□□□ -0.54
COL4A1-205ENST00000615732 CETN3O15182 167 aa11.69□□□□□ -0.54
COL4A1-205ENST00000615732 EIF3DO15371 548 aaKnown RBP eCLIP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms