RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 DPF3Q92784 378 aa19.71■□□□□ 0.75
GABPB1-212ENST00000615671 HIST1H2AGP0C0S8 130 aaPredicted RBP19.71■□□□□ 0.75
GABPB1-212ENST00000615671 HIST1H2ADP20671 130 aa19.71■□□□□ 0.75
GABPB1-212ENST00000615671 GGCXP38435 758 aa19.71■□□□□ 0.75
GABPB1-212ENST00000615671 EFCAB12Q6NXP0 572 aa19.71■□□□□ 0.75
GABPB1-212ENST00000615671 HIST1H2AHQ96KK5 128 aa19.71■□□□□ 0.75
GABPB1-212ENST00000615671 FOPNLQ96NB1 174 aa19.71■□□□□ 0.75
GABPB1-212ENST00000615671 HIST1H2AJQ99878 128 aa19.71■□□□□ 0.75
GABPB1-212ENST00000615671 H2AFJQ9BTM1 129 aa19.71■□□□□ 0.75
GABPB1-212ENST00000615671 PRG3Q9Y2Y8 225 aaPredicted RBP19.71■□□□□ 0.75
GABPB1-212ENST00000615671 MYO1GB0I1T2 1018 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 EEF2KO00418 725 aaKnown RBP19.7■□□□□ 0.74
GABPB1-212ENST00000615671 GMPSP49915 693 aaPredicted RBP19.7■□□□□ 0.74
GABPB1-212ENST00000615671 ARMC6Q6NXE6 501 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 PROM2Q8N271 834 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 TSSK1BQ9BXA7 367 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 ENTPD7Q9NQZ7 604 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 ZNF70Q9UC06 446 aaPredicted RBP19.7■□□□□ 0.74
GABPB1-212ENST00000615671 ATN1P54259 1190 aaPredicted RBP19.7■□□□□ 0.74
GABPB1-212ENST00000615671 DMC1Q14565 340 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 ABI2Q9NYB9 513 aaPredicted RBP19.7■□□□□ 0.74
GABPB1-212ENST00000615671 CD274Q9NZQ7 290 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 SKIP12755 728 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 MAFGO15525 162 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 C10orf120Q5SQS8 335 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 C16orf87Q6PH81 154 aa19.7■□□□□ 0.74
GABPB1-212ENST00000615671 SRBD1Q8N5C6 995 aaKnown RBP19.7■□□□□ 0.74
GABPB1-212ENST00000615671 RPAP1Q9BWH6 1393 aaPredicted RBP19.7■□□□□ 0.74
GABPB1-212ENST00000615671 CCDC151A5D8V7 595 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 CAPZA2P47755 286 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 ALDH1A3P47895 512 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 NBPF20Q3BBV1 942 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 NBPF10Q6P3W6 841 aaKnown RBP19.69■□□□□ 0.74
GABPB1-212ENST00000615671 MIF4GDA9UHW6 222 aaKnown RBP19.69■□□□□ 0.74
GABPB1-212ENST00000615671 ASAP2O43150 1006 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 TEX33O43247 280 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 GNASQ5JWF2 1037 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 TBC1D19Q8N5T2 526 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 MTBPQ96DY7 904 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 OSBPL9Q96SU4 736 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 LRG1P02750 347 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 MYBL1P10243 752 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 AGPAT1Q99943 283 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 EML4Q9HC35 981 aaKnown RBP19.69■□□□□ 0.74
GABPB1-212ENST00000615671 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
GABPB1-212ENST00000615671 ERVK-7P63135 1459 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 KIFC3Q9BVG8 833 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 SMARCAD1Q9H4L7 1026 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 SCP2P22307 547 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 PCDHB8Q9UN66 801 aa19.69■□□□□ 0.74
GABPB1-212ENST00000615671 NDUFS3O75489 264 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 APRTP07741 180 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 MZF1P28698 734 aaPredicted RBP19.68■□□□□ 0.74
GABPB1-212ENST00000615671 PBLDP30039 288 aaPredicted RBP19.68■□□□□ 0.74
GABPB1-212ENST00000615671 THPOP40225 353 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 ORC1Q13415 861 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 SMTNL2Q2TAL5 461 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 ST13P4Q8IZP2 240 aaPredicted RBP19.68■□□□□ 0.74
GABPB1-212ENST00000615671 STKLD1Q8NE28 680 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 VMP1Q96GC9 406 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 TRIM62Q9BVG3 475 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 HERC5Q9UII4 1024 aaKnown RBP19.68■□□□□ 0.74
GABPB1-212ENST00000615671 WEE2P0C1S8 567 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 GOLGA7BQ2TAP0 167 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 ZRANB3Q5FWF4 1079 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 MS4A14Q96JA4 679 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 LRRC37BQ96QE4 947 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 EPC1Q9H2F5 836 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 GLRA4Q5JXX5 417 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 DAGLAQ9Y4D2 1042 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 OVOS2A0A0G2JMS6 1433 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 OVOS2A0A0J9YW53 1432 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 OVOS2Q6IE36 1432 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 EMC2Q15006 297 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.68■□□□□ 0.747e-6■■■■□ 20.5
GABPB1-212ENST00000615671 HAUS5O94927 633 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 TRIM48Q8IWZ4 208 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 DHX40Q8IX18 779 aaKnown RBP19.68■□□□□ 0.74
GABPB1-212ENST00000615671 CCDC33Q8N5R6 958 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 ZFATQ9P243 1243 aa19.68■□□□□ 0.74
GABPB1-212ENST00000615671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.742e-9■■■■■ 40.7
GABPB1-212ENST00000615671 CCDC188H7C350 402 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 ARFIP2P53365 341 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 OSBPL5Q9H0X9 879 aaPredicted RBP19.67■□□□□ 0.74
GABPB1-212ENST00000615671 BRAFP15056 766 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 YY1P25490 414 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 RAP1GDS1P52306 607 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 EPHA7Q15375 998 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 SEZ6Q53EL9 994 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 CEP55Q53EZ4 464 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 MB21D2Q8IYB1 491 aaPredicted RBP19.67■□□□□ 0.74
GABPB1-212ENST00000615671 IPMKQ8NFU5 416 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 ARHGEF38Q9NXL2 777 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 ENDOD1O94919 500 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 PDGFRAP16234 1089 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 ADRA2BP18089 450 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 EFNA5P52803 228 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 RBP5P82980 135 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 CDC42EP5Q6NZY7 148 aa19.67■□□□□ 0.74
GABPB1-212ENST00000615671 RPAINQ86UA6 219 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms