RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 BARX2Q9UMQ3 279 aaPredicted RBP18.25■□□□□ 0.51
CBWD3-211ENST00000615061 PCDHB13Q9Y5F0 798 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 STYXL1Q9Y6J8 313 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 CLTAP09496 248 aa18.24■□□□□ 0.51
CBWD3-211ENST00000615061 KCNE1P15382 129 aa18.24■□□□□ 0.51
CBWD3-211ENST00000615061 ANP32AP39687 249 aaKnown RBP18.24■□□□□ 0.51
CBWD3-211ENST00000615061 ACOT2P49753 483 aa18.24■□□□□ 0.51
CBWD3-211ENST00000615061 EHHADHQ08426 723 aa18.24■□□□□ 0.51
CBWD3-211ENST00000615061 TJAP1Q5JTD0 557 aa18.24■□□□□ 0.51
CBWD3-211ENST00000615061 LLGL2Q6P1M3 1020 aa18.24■□□□□ 0.51
CBWD3-211ENST00000615061 C3orf58Q8NDZ4 430 aa18.24■□□□□ 0.51
CBWD3-211ENST00000615061 ZSWIM2Q8NEG5 633 aa18.24■□□□□ 0.51
CBWD3-211ENST00000615061 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.24■□□□□ 0.51
CBWD3-211ENST00000615061 CLEC1BQ9P126 229 aa18.24■□□□□ 0.51
CBWD3-211ENST00000615061 TTC26A0AVF1 554 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 NCK2O43639 380 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 TADA2AO75478 443 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 BMP1P13497 986 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 HOXD13P35453 343 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 NDUFV1P49821 464 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 FAM26FQ5R3K3 315 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 POMGNT1Q8WZA1 660 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 TUBGCP4Q9UGJ1 667 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 CPSF3Q9UKF6 684 aaKnown RBP18.23■□□□□ 0.51
CBWD3-211ENST00000615061 IRAK3Q9Y616 596 aa18.23■□□□□ 0.51
CBWD3-211ENST00000615061 LACTBL1A8MY62 500 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 KLRC4O43908 158 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 LILRB3O75022 631 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 PRR29P0C7W0 189 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 KCNC3Q14003 757 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 UPP1Q16831 310 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 AAK1Q2M2I8 961 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 LEXMQ3ZCV2 418 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 CD300LGQ6UXG3 332 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 SYCP3Q8IZU3 236 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 HERC2P3Q9BVR0 1158 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 AGO2Q9UKV8 859 aaKnown RBP18.22■□□□□ 0.51
CBWD3-211ENST00000615061 CLASP2O75122 1294 aaKnown RBP18.22■□□□□ 0.51
CBWD3-211ENST00000615061 B3GAT3O94766 335 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 ALCAMQ13740 583 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 SLFN12LQ6IEE8 588 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 EPM2AIP1Q7L775 607 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-211ENST00000615061 FAM212AQ96EL1 285 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 SAAL1Q96ER3 474 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 CDCA3Q99618 268 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-211ENST00000615061 CBWD1Q9BRT8 395 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 RPF1Q9H9Y2 349 aaKnown RBP18.22■□□□□ 0.51
CBWD3-211ENST00000615061 SLC39A2Q9NP94 309 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 CHST7Q9NS84 486 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 CIZ1Q9ULV3 898 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-211ENST00000615061 EXOC7Q9UPT5 735 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 HCFC2Q9Y5Z7 792 aa18.22■□□□□ 0.51
CBWD3-211ENST00000615061 PLXNA3P51805 1871 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 URODP06132 367 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 CNPP09543 421 aaKnown RBP18.21■□□□□ 0.51
CBWD3-211ENST00000615061 GLUD2P49448 558 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 GUCY2FP51841 1108 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 BMS1Q14692 1282 aaKnown RBP18.21■□□□□ 0.51
CBWD3-211ENST00000615061 RTP2Q5QGT7 225 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 KIAA0319Q5VV43 1072 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 CRELD2Q6UXH1 353 aaPredicted RBP18.21■□□□□ 0.51
CBWD3-211ENST00000615061 KIF12Q96FN5 646 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 MSLNLQ96KJ4 702 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 NECAB3Q96P71 396 aaPredicted RBP18.21■□□□□ 0.51
CBWD3-211ENST00000615061 COL25A1Q9BXS0 654 aaPredicted RBP18.21■□□□□ 0.51
CBWD3-211ENST00000615061 PCIF1Q9H4Z3 704 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 PLEKHA5Q9HAU0 1116 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 MRPL17Q9NRX2 175 aaKnown RBP18.21■□□□□ 0.51
CBWD3-211ENST00000615061 SLC38A7Q9NVC3 462 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 USP25Q9UHP3 1055 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 TRIOO75962 3097 aa18.21■□□□□ 0.51
CBWD3-211ENST00000615061 SF3B1O75533 1304 aaKnown RBP eCLIP18.21■□□□□ 0.51
CBWD3-211ENST00000615061 PVALEFA0A1B0GWK0 134 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 I3L4J1 428 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 PODXLO00592 558 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 ZNF202O95125 648 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 IL9P15248 144 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 DSG1Q02413 1049 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 PPP2R3AQ06190 1150 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 PTCRAQ6ISU1 281 aaPredicted RBP18.2■□□□□ 0.5
CBWD3-211ENST00000615061 KRBA2Q6ZNG9 492 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 SCFD1Q8WVM8 642 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 KLHL5Q96PQ7 755 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 STK39Q9UEW8 545 aa18.2■□□□□ 0.5
CBWD3-211ENST00000615061 EPCAMP16422 314 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 SCN1AP35498 2009 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 BRCC3P46736 316 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 WNT7BP56706 349 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 ZBTB6Q15916 424 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 KYAT1Q16773 422 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 USP41Q3LFD5 358 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 FAM171A1Q5VUB5 890 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 KIAA1841Q6NSI8 718 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 DCLRE1AQ6PJP8 1040 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 CEP57Q86XR8 500 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 NELFCDQ8IXH7 590 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 TMEM87AQ8NBN3 555 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 ZNF507Q8TCN5 953 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 RIN2Q8WYP3 895 aaPredicted RBP18.19■□□□□ 0.5
CBWD3-211ENST00000615061 UROC1Q96N76 676 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms