RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 IMMTQ16891 758 aaKnown RBP8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 AXDND1Q5T1B0 1012 aaPredicted RBP8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PKN3Q6P5Z2 889 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 C1orf228Q6PIY5 440 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SKAP1Q86WV1 359 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SYNPOQ8N3V7 929 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SMG8Q8ND04 991 aaKnown RBP8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 LNX1Q8TBB1 728 aaPredicted RBP8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MDM1Q8TC05 714 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PIK3R5Q8WYR1 880 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MSANTD3Q96H12 275 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZSWIM3Q96MP5 696 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CEP89Q96ST8 783 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 GAD1Q99259 594 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SLC32A1Q9H598 525 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 GABBR1Q9UBS5 961 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 GTF3C3Q9Y5Q9 886 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SPTA1P02549 2419 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 LAMA5O15230 3695 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 HECTD1Q9ULT8 2610 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 VWA8A3KMH1 1905 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 IGKV6-21A0A0C4DH24 114 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MYBPHLA2RUH7 354 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 UPK3BL1B0FP48 263 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 UPK3BL2E5RIL1 263 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 J3QKU1 62 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZNF263O14978 683 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 DCLK1O15075 740 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ATXN7O15265 892 aaPredicted RBP8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RHOBTB1O94844 696 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MICAL2O94851 1124 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 REC8O95072 547 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SMARCA1P28370 1054 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 HOXA11P31270 313 aaPredicted RBP8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 VIPR2P41587 438 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 FAM193AP78312 1265 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CDC42EP1Q00587 391 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RAB33AQ14088 237 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 NBR1Q14596 966 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 TARBP2Q15633 366 aaKnown RBP8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CCNI2Q6ZMN8 369 aaPredicted RBP8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RTL10Q7L3V2 364 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CATSPER4Q7RTX7 472 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 GSTCDQ8NEC7 633 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 DEPDC1BQ8WUY9 529 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 TCEAL4Q96EI5 215 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RRP36Q96EU6 259 aaKnown RBP8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 FAM167AQ96KS9 214 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SPZ1Q9BXG8 430 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 INO80BQ9C086 356 aaPredicted RBP8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 C8orf33Q9H7E9 229 aaPredicted RBP8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 AGPAT5Q9NUQ2 364 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ADAM28Q9UKQ2 775 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZNF462Q96JM2 2506 aa8.04□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PI4KAP42356 2102 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 THADAQ6YHU6 1953 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CCDC194A0A1B0GVG4 234 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 WDR27A2RRH5 827 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ARL5CA6NH57 179 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SLC38A8A6NNN8 435 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SPECC1L-ADORA2AF8WAN1 911 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MAP3K7O43318 606 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MOSPD3O75425 235 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 OATP04181 439 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PTPN2P17706 415 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CTHP32929 405 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RDXP35241 583 aaKnown RBP8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CCR2P41597 374 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SCNN1GP51170 649 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SRSF1Q07955 248 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SEMA3BQ13214 749 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PON2Q15165 354 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ELF2Q15723 593 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 E2F4Q16254 413 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PSMD5Q16401 504 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RNF20Q5VTR2 975 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZNF746Q6NUN9 644 aaPredicted RBP8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 NIPA1Q7RTP0 329 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZNF410Q86VK4 478 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PACS2Q86VP3 889 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RALGPS2Q86X27 583 aaPredicted RBP8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 KSR1Q8IVT5 923 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MFSD6LQ8IWD5 586 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RABGGTAQ92696 567 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SMARCD2Q92925 531 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PGBD1Q96JS3 809 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZFP42Q96MM3 310 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 TTPALQ9BTX7 342 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 IL25Q9H293 177 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CNNM2Q9H8M5 875 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 TRPV4Q9HBA0 871 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 IFT122Q9HBG6 1241 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 UBN1Q9NPG3 1134 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 NRBP2Q9NSY0 501 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 POLR3BQ9NW08 1133 aaPredicted RBP8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SEPT9Q9UHD8 586 aaPredicted RBP8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PCDHA10Q9Y5I2 948 aa8.03□□□□□ -1.12
PTCHD3P1-201ENST00000612350 USP9XQ93008 2570 aaPredicted RBP8.02□□□□□ -1.13
PTCHD3P1-201ENST00000612350 IGLV3-22A0A075B6J6 115 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms