RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 FKBP1AP62942 108 aaKnown RBP11.44□□□□□ -0.58
PCDHGC3-202ENST00000611950 C4orf46Q504U0 113 aa11.44□□□□□ -0.58
PCDHGC3-202ENST00000611950 BTNL9Q6UXG8 535 aa11.44□□□□□ -0.58
PCDHGC3-202ENST00000611950 CCDC25Q86WR0 208 aa11.44□□□□□ -0.58
PCDHGC3-202ENST00000611950 SLC15A3Q8IY34 581 aa11.44□□□□□ -0.58
PCDHGC3-202ENST00000611950 SELENOSQ9BQE4 189 aa11.44□□□□□ -0.58
PCDHGC3-202ENST00000611950 DNAJC17Q9NVM6 304 aaKnown RBP11.44□□□□□ -0.58
PCDHGC3-202ENST00000611950 ZMYM2Q9UBW7 1377 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 GOLGA8IPA6NC78 632 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 GOLGA8JA6NMD2 632 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 TCP10L2B9ZVM9 353 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 HGSO14964 777 aaPredicted RBP11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 EZRP15311 586 aaKnown RBP11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 DESP17661 470 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 GBP2P32456 591 aaPredicted RBP11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 EMC10Q5UCC4 262 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 NSMFQ6X4W1 530 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 ALG3Q92685 438 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 KRT35Q92764 455 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 C18orf8Q96DM3 657 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 CSRNP1Q96S65 589 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 MPHOSPH6Q99547 160 aaKnown RBP11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 FBXO28Q9NVF7 368 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 COG5Q9UP83 839 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 FOXN3O00409 490 aaPredicted RBP11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 MEFVO15553 781 aaPredicted RBP11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 NDUFB5O43674 189 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 ATP9BO43861 1147 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 SLITRK3O94933 977 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 SLC34A2O95436 690 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 GCLMP48507 274 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 FMO5P49326 533 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 BMT2Q1RMZ1 405 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 CCDC38Q502W7 563 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 CIAPIN1Q6FI81 312 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 SUPT20HQ8NEM7 779 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 PBKQ96KB5 322 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 PLCB1Q9NQ66 1216 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 CTTNBP2NLQ9P2B4 639 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 UTP11Q9Y3A2 253 aaKnown RBP11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 TIMM22Q9Y584 194 aa11.43□□□□□ -0.58
PCDHGC3-202ENST00000611950 FOXO6A8MYZ6 492 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 H0YGN5 161 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 GAS7O60861 476 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 ARP10275 920 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 TNFAIP3P21580 790 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 SOX5P35711 763 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 PSMC2P35998 433 aaKnown RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 KCNJ1P48048 391 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 IFNAR2P48551 515 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 JAM2P57087 298 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 MESDQ14696 234 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 IFI16Q16666 785 aaKnown RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 PHLDB3Q6NSJ2 640 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 TMC3Q7Z5M5 1100 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 SPATS2Q86XZ4 545 aaKnown RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 GALNT15Q8N3T1 639 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 CYFIP2Q96F07 1278 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 UBE2TQ9NPD8 197 aaPredicted RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 GGT7Q9UJ14 662 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 PRELID1Q9Y255 219 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 NFS1Q9Y697 457 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 BZW2Q9Y6E2 419 aaKnown RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 POLR2AP24928 1970 aaKnown RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 PIK3CDO00329 1044 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 MTRF1O75570 445 aaKnown RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 SMNDC1O75940 238 aaKnown RBP eCLIP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 EYA4O95677 639 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 CYP3A4P08684 503 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 ACTN3Q08043 901 aaPredicted RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 C2CD6Q53TS8 623 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 MAGEC3Q8TD91 643 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 ACTRT1Q8TDG2 376 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 HSD17B14Q9BPX1 270 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 MCOLN1Q9GZU1 580 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 INTS2Q9H0H0 1204 aaKnown RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 MUC3BQ9H195 1237 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 PARVGQ9HBI0 331 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 HOMER2Q9NSB8 354 aa11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 CORO1CQ9ULV4 474 aaPredicted RBP11.42□□□□□ -0.58
PCDHGC3-202ENST00000611950 TCRBV7S2A1N4TA0A589 114 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 YDJCA8MPS7 323 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 PPP1R12BO60237 982 aaPredicted RBP11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 FGFR4P22455 802 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 NEK2P51955 445 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 CSE1LP55060 971 aaKnown RBP11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 MYL7Q01449 175 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 ARHGEF6Q15052 776 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 B4GALNT4Q76KP1 1039 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 MIGA2Q7L4E1 593 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 HS2ST1Q7LGA3 356 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 OTOP1Q7RTM1 612 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 LRRC49Q8IUZ0 686 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 FBXO25Q8TCJ0 367 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 RUBCNQ92622 972 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 LRRC45Q96CN5 670 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 FMO2Q99518 471 aa11.41□□□□□ -0.58
PCDHGC3-202ENST00000611950 MLXIPLQ9NP71 852 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms