RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 PRKCIP41743 596 aa13.27□□□□□ -0.28
TP53-219ENST00000610538 C15orf39Q6ZRI6 1047 aa13.27□□□□□ -0.28
TP53-219ENST00000610538 C7orf31Q8N865 590 aa13.27□□□□□ -0.28
TP53-219ENST00000610538 MYO6Q9UM54 1294 aa13.27□□□□□ -0.28
TP53-219ENST00000610538 UMODL1Q5DID0 1318 aa13.27□□□□□ -0.28
TP53-219ENST00000610538 RRN3P2A6NIE6 340 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 DUSP11O75319 330 aaKnown RBP13.27□□□□□ -0.29
TP53-219ENST00000610538 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.29
TP53-219ENST00000610538 SCP2P22307 547 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 GTF2H1P32780 548 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 MFAP3P55082 362 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 CLDN10P78369 228 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 FAM47CQ5HY64 1035 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 WDR44Q5JSH3 913 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 BRSK2Q8IWQ3 736 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 KCNN1Q92952 543 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 GOLPH3Q9H4A6 298 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 PDZD7Q9H5P4 517 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 APOBEC3GQ9HC16 384 aaKnown RBP13.27□□□□□ -0.29
TP53-219ENST00000610538 TNFSF13BQ9Y275 285 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 HES2Q9Y543 173 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 COL1A2P08123 1366 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 KIAA0391O15091 583 aaKnown RBP13.27□□□□□ -0.29
TP53-219ENST00000610538 STAG3L1P0CL83 205 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.29
TP53-219ENST00000610538 TNFAIP3P21580 790 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 NCOA4Q13772 614 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 VPS36Q86VN1 386 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 PDCL2Q8N4E4 241 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 ZNF784Q8NCA9 323 aaPredicted RBP13.27□□□□□ -0.29
TP53-219ENST00000610538 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 NAPGQ99747 312 aaPredicted RBP13.27□□□□□ -0.29
TP53-219ENST00000610538 CXCL16Q9H2A7 254 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 L2HGDHQ9H9P8 463 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 C1orf112Q9NSG2 853 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 PUF60Q9UHX1 559 aaKnown RBP13.27□□□□□ -0.29
TP53-219ENST00000610538 TSKSQ9UJT2 592 aa13.27□□□□□ -0.29
TP53-219ENST00000610538 PMM2O15305 246 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 TSPAN1O60635 241 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 GPR32O75388 356 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 MYCP01106 439 aaPredicted RBP13.26□□□□□ -0.29
TP53-219ENST00000610538 KRT19P08727 400 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 VEGFBP49765 207 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 KIF22Q14807 665 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 TRAPPC11Q7Z392 1133 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 EFCAB13Q8IY85 973 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 CGRRF1Q99675 332 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 NFKBIZQ9BYH8 718 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 ADAMTS10Q9H324 1103 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 RPF1Q9H9Y2 349 aaKnown RBP13.26□□□□□ -0.29
TP53-219ENST00000610538 NUB1Q9Y5A7 615 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 MEFVO15553 781 aaPredicted RBP13.26□□□□□ -0.29
TP53-219ENST00000610538 SLU7O95391 586 aaKnown RBP13.26□□□□□ -0.29
TP53-219ENST00000610538 RARBP10826 455 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 CXCR5P32302 372 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 NOP2P46087 812 aaKnown RBP13.26□□□□□ -0.29
TP53-219ENST00000610538 APLP1P51693 650 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 MYL6P60660 151 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 NAB2Q15742 525 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 CATSPER4Q7RTX7 472 aa13.26□□□□□ -0.29
TP53-219ENST00000610538 NOP9Q86U38 636 aaKnown RBP13.26□□□□□ -0.29
TP53-219ENST00000610538 RPUSD2Q8IZ73 545 aaKnown RBP13.26□□□□□ -0.29
TP53-219ENST00000610538 LACTBL1A8MY62 500 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 HAS3O00219 553 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 NCK2O43639 380 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 MMEP08473 750 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 GUCY2FP51841 1108 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 MCCD1P59942 119 aaPredicted RBP13.25□□□□□ -0.29
TP53-219ENST00000610538 BMS1Q14692 1282 aaKnown RBP13.25□□□□□ -0.29
TP53-219ENST00000610538 DUOXA2Q1HG44 320 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 NBPF20Q3BBV1 942 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 ZNF394Q53GI3 561 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 FAM71AQ8IYT1 594 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 OLIG1Q8TAK6 271 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 SHC3Q92529 594 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 VTI1AQ96AJ9 217 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 CAPZA3Q96KX2 299 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 AGPAT1Q99943 283 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 XPNPEP3Q9NQH7 507 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 PRDM10Q9NQV6 1147 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 PACSIN2Q9UNF0 486 aaPredicted RBP13.25□□□□□ -0.29
TP53-219ENST00000610538 MRFAP1Q9Y605 127 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 ZNF236Q9UL36 1845 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 C17orf102A2RUQ5 167 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 MBLAC1A4D2B0 266 aaPredicted RBP13.25□□□□□ -0.29
TP53-219ENST00000610538 ZNF185O15231 689 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 SEPT4O43236 478 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 CTIFO43310 598 aaKnown RBP13.25□□□□□ -0.29
TP53-219ENST00000610538 NFICP08651 508 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 TMEM191BP0C7N4 346 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 CD58P19256 250 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 HOXA11P31270 313 aaPredicted RBP13.25□□□□□ -0.29
TP53-219ENST00000610538 GALCP54803 685 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 NOP14P78316 857 aaKnown RBP13.25□□□□□ -0.29
TP53-219ENST00000610538 ADAM17P78536 824 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 SCARA5Q6ZMJ2 495 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 SLC30A5Q8TAD4 765 aa13.25□□□□□ -0.29
TP53-219ENST00000610538 EPS8L1Q8TE68 723 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms