RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 PVALEFA0A1B0GWK0 134 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 PHF20L1A8MW92 1017 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 SULT1E1P49888 294 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 TRAF7Q6Q0C0 670 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 SNX12Q9UMY4 172 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 C5orf58C9J3I9 102 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 FOXN1O15353 648 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 NBNO60934 754 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 IMPDH2P12268 514 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 STX3Q13277 289 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 TBC1D23Q9NUY8 699 aa13.76□□□□□ -0.21
USP6NL-205ENST00000609104 GJC2Q5T442 439 aaPredicted RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 SNRNP48Q6IEG0 339 aaKnown RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 IL1RL2Q9HB29 575 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 SATB2Q9UPW6 733 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 CAB39Q9Y376 341 aaPredicted RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 ERVV-1B6SEH8 477 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 FAM162AQ96A26 154 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 GIMAP4Q9NUV9 329 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 LZTS3O60299 673 aaPredicted RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 P4HBP07237 508 aaKnown RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 MLH1P40692 756 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 C6orf10Q5SRN2 563 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 BTBD8Q5XKL5 378 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 PRPF39Q86UA1 669 aaKnown RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 RCOR2Q8IZ40 523 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 TDRD3Q9H7E2 651 aaKnown RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 RPAP1Q9BWH6 1393 aaPredicted RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 CYTH3O43739 400 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 IYDQ6PHW0 289 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 IFNEQ86WN2 208 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 PIDD1Q9HB75 910 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 DAB2IPQ5VWQ8 1189 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 SRLQ86TD4 932 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 WDR48Q8TAF3 677 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 QTRT2Q9H974 415 aaKnown RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 TRIM10Q9UDY6 481 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 CDYLQ9Y232 598 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 ZHX2Q9Y6X8 837 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 HLFQ16534 295 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 ANKS3Q6ZW76 656 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 SCFD1Q8WVM8 642 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 TASP1Q9H6P5 420 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 SLC9A1P19634 815 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 C3orf62Q6ZUJ4 267 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 USE1Q9NZ43 259 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 V9GYQ6 96 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 PHF2O75151 1096 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 MTHFD1LQ6UB35 978 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 RAB42Q8N4Z0 105 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 TSC22D4Q9Y3Q8 395 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 ZNF200P98182 395 aaPredicted RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 ANGPT1Q15389 498 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 SYDE1Q6ZW31 735 aaPredicted RBP13.75□□□□□ -0.21
USP6NL-205ENST00000609104 PCMTD2Q9NV79 361 aa13.75□□□□□ -0.21
USP6NL-205ENST00000609104 ZNF197O14709 1029 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 SHC4Q6S5L8 630 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 SPATA33Q96N06 139 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 CFAP74Q9C0B2 1584 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 HSD17B4P51659 736 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 C4orf33Q8N1A6 199 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 H2AFY2Q9P0M6 372 aaPredicted RBP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 NEU2Q9Y3R4 380 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 PPP1R37O75864 691 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 MYL2P10916 166 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 KRT76Q01546 638 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 DNAL1Q4LDG9 190 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 RUBCNQ92622 972 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 IRX2Q9BZI1 471 aaPredicted RBP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 C16orf96A6NNT2 1141 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 DGKIO75912 1065 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 TDP2O95551 362 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 TBL3Q12788 808 aaKnown RBP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 LMBRD2Q68DH5 695 aaPredicted RBP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 RCSD1Q6JBY9 416 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 TRPM8Q7Z2W7 1104 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 MMP19Q99542 508 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 TRIM51Q9BSJ1 452 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 EIF3HO15372 352 aaKnown RBP eCLIP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 GUCA1CO95843 209 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 PCSK7Q16549 785 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 HORMAD1Q86X24 394 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 ASAP3Q8TDY4 903 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 RANBP17Q9H2T7 1088 aaKnown RBP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 TMEM245Q9H330 911 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 FKBP9O95302 570 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 SLC1A1P43005 524 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 PSMC5P62195 406 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 CIAPIN1Q6FI81 312 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 FKBP9P1Q75LS8 142 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 SMG5Q9UPR3 1016 aaKnown RBP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 SNAP23O00161 211 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 RALAP11233 206 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 KIF2BQ8N4N8 673 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 UBTFL6P0CB48 400 aaPredicted RBP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 PRDX5P30044 214 aa13.74□□□□□ -0.21
USP6NL-205ENST00000609104 BYSLQ13895 437 aaKnown RBP13.74□□□□□ -0.21
USP6NL-205ENST00000609104 LVRNQ6Q4G3 990 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms