RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 CDT1Q9H211 546 aa23.99■■□□□ 1.43
TMEM248-207ENST00000607045 POLIQ9UNA4 740 aa23.99■■□□□ 1.43
TMEM248-207ENST00000607045 SPTBN4Q9H254 2564 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 HNRNPA1P09651 372 aaKnown RBP eCLIP23.98■■□□□ 1.43
TMEM248-207ENST00000607045 TKTP29401 623 aaKnown RBP23.98■■□□□ 1.43
TMEM248-207ENST00000607045 MAPK7Q13164 816 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 XKR4Q5GH76 650 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 PARM1Q6UWI2 310 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 DTHD1Q6ZMT9 781 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 SLC7A14Q8TBB6 771 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 FGF14Q92915 247 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 ZBTB45Q96K62 511 aaPredicted RBP23.98■■□□□ 1.43
TMEM248-207ENST00000607045 ZMAT2Q96NC0 199 aaKnown RBP23.98■■□□□ 1.43
TMEM248-207ENST00000607045 RAB34Q9BZG1 259 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 TMEM134Q9H6X4 195 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.98■■□□□ 1.43
TMEM248-207ENST00000607045 STK24Q9Y6E0 443 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 CDY1Q9Y6F8 540 aa23.98■■□□□ 1.43
TMEM248-207ENST00000607045 TMEM189-UBE2V1I3L0A0 370 aa23.97■■□□□ 1.43
TMEM248-207ENST00000607045 GRM5P41594 1212 aa23.97■■□□□ 1.43
TMEM248-207ENST00000607045 ZRSR1Q15695 479 aaKnown RBP23.97■■□□□ 1.43
TMEM248-207ENST00000607045 PDXDC1Q6P996 788 aa23.97■■□□□ 1.43
TMEM248-207ENST00000607045 ITFG1Q8TB96 612 aa23.97■■□□□ 1.43
TMEM248-207ENST00000607045 KMT5AQ9NQR1 393 aa23.97■■□□□ 1.43
TMEM248-207ENST00000607045 HCFC1R1Q9NWW0 138 aa23.97■■□□□ 1.43
TMEM248-207ENST00000607045 ARHGAP28Q9P2N2 729 aa23.97■■□□□ 1.43
TMEM248-207ENST00000607045 MTRRQ9UBK8 725 aa23.97■■□□□ 1.43
TMEM248-207ENST00000607045 CDH7Q9ULB5 785 aa23.97■■□□□ 1.43
TMEM248-207ENST00000607045 SLC16A4O15374 487 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 MEFVO15553 781 aaPredicted RBP23.96■■□□□ 1.43
TMEM248-207ENST00000607045 GPC5P78333 572 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 RAD51AP2Q09MP3 1159 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 ANGPT1Q15389 498 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 MCTP1Q6DN14 999 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 FGF13Q92913 245 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 PLIN2Q99541 437 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 TCHPQ9BT92 498 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 CCDC94Q9BW85 323 aaPredicted RBP23.96■■□□□ 1.43
TMEM248-207ENST00000607045 MRPL4Q9BYD3 311 aaKnown RBP23.96■■□□□ 1.43
TMEM248-207ENST00000607045 TBC1D17Q9HA65 648 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 DNMT3BQ9UBC3 853 aaKnown RBP23.96■■□□□ 1.43
TMEM248-207ENST00000607045 FAM186AA6NE01 2351 aa23.96■■□□□ 1.43
TMEM248-207ENST00000607045 PRR23AA6NEV1 266 aa23.95■■□□□ 1.42
TMEM248-207ENST00000607045 ABLIM1O14639 778 aa23.95■■□□□ 1.42
TMEM248-207ENST00000607045 PRPHP41219 470 aa23.95■■□□□ 1.42
TMEM248-207ENST00000607045 YARSP54577 528 aaKnown RBP23.95■■□□□ 1.42
TMEM248-207ENST00000607045 DMP1Q13316 513 aaPredicted RBP23.95■■□□□ 1.42
TMEM248-207ENST00000607045 UVSSAQ2YD98 709 aa23.95■■□□□ 1.42
TMEM248-207ENST00000607045 ZNF568Q3ZCX4 644 aa23.95■■□□□ 1.42
TMEM248-207ENST00000607045 APBB1IPQ7Z5R6 666 aaPredicted RBP23.95■■□□□ 1.42
TMEM248-207ENST00000607045 DDX27Q96GQ7 796 aaKnown RBP23.95■■□□□ 1.42
TMEM248-207ENST00000607045 UROC1Q96N76 676 aa23.95■■□□□ 1.42
TMEM248-207ENST00000607045 PNMA5Q96PV4 448 aa23.95■■□□□ 1.42
TMEM248-207ENST00000607045 RBM19Q9Y4C8 960 aaKnown RBP23.95■■□□□ 1.42
TMEM248-207ENST00000607045 BACE2Q9Y5Z0 518 aa23.95■■□□□ 1.42
TMEM248-207ENST00000607045 ZFP37Q9Y6Q3 630 aaPredicted RBP23.95■■□□□ 1.42
TMEM248-207ENST00000607045 PHLPP2Q6ZVD8 1323 aa23.94■■□□□ 1.42
TMEM248-207ENST00000607045 LAD1O00515 517 aa23.94■■□□□ 1.42
TMEM248-207ENST00000607045 PROZP22891 400 aa23.94■■□□□ 1.42
TMEM248-207ENST00000607045 HOXA9P31269 272 aa23.94■■□□□ 1.42
TMEM248-207ENST00000607045 C18orf25Q96B23 403 aaPredicted RBP23.94■■□□□ 1.42
TMEM248-207ENST00000607045 ACAP3Q96P50 834 aa23.94■■□□□ 1.42
TMEM248-207ENST00000607045 NTPCRQ9BSD7 190 aaKnown RBP23.94■■□□□ 1.42
TMEM248-207ENST00000607045 SLC2A4RGQ9NR83 387 aa23.94■■□□□ 1.42
TMEM248-207ENST00000607045 TRIP11Q15643 1979 aa23.94■■□□□ 1.42
TMEM248-207ENST00000607045 VWA8A3KMH1 1905 aa23.94■■□□□ 1.42
TMEM248-207ENST00000607045 TRAPPC3O43617 180 aa23.93■■□□□ 1.42
TMEM248-207ENST00000607045 XYLBO75191 536 aa23.93■■□□□ 1.42
TMEM248-207ENST00000607045 DCNP07585 359 aaKnown RBP23.93■■□□□ 1.42
TMEM248-207ENST00000607045 SEZ6Q53EL9 994 aa23.93■■□□□ 1.42
TMEM248-207ENST00000607045 SPECC1Q5M775 1068 aa23.93■■□□□ 1.42
TMEM248-207ENST00000607045 POTEHQ6S545 545 aa23.93■■□□□ 1.42
TMEM248-207ENST00000607045 TMEM130Q8N3G9 435 aa23.93■■□□□ 1.42
TMEM248-207ENST00000607045 DRC1Q96MC2 740 aa23.93■■□□□ 1.42
TMEM248-207ENST00000607045 ARHGEF3Q9NR81 526 aa23.93■■□□□ 1.42
TMEM248-207ENST00000607045 TOPORSQ9NS56 1045 aaPredicted RBP23.93■■□□□ 1.42
TMEM248-207ENST00000607045 DAXXQ9UER7 740 aaPredicted RBP23.93■■□□□ 1.42
TMEM248-207ENST00000607045 PODXLO00592 558 aa23.92■■□□□ 1.42
TMEM248-207ENST00000607045 MCF2P10911 925 aa23.92■■□□□ 1.42
TMEM248-207ENST00000607045 HARSP12081 509 aaKnown RBP23.92■■□□□ 1.42
TMEM248-207ENST00000607045 KCNE1P15382 129 aa23.92■■□□□ 1.42
TMEM248-207ENST00000607045 RFX1P22670 979 aa23.92■■□□□ 1.42
TMEM248-207ENST00000607045 ANKS3Q6ZW76 656 aa23.92■■□□□ 1.42
TMEM248-207ENST00000607045 NKD2Q969F2 451 aaPredicted RBP23.92■■□□□ 1.42
TMEM248-207ENST00000607045 SNX27Q96L92 541 aa23.92■■□□□ 1.42
TMEM248-207ENST00000607045 ZNF292O60281 2723 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 EP300Q09472 2414 aaPredicted RBP23.91■■□□□ 1.42
TMEM248-207ENST00000607045 NPHP3-ACAD11A0A0J9YXS1 232 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 GUCY2CP25092 1073 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 ATP2C1P98194 919 aaPredicted RBP23.91■■□□□ 1.42
TMEM248-207ENST00000607045 SLC10A6Q3KNW5 377 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 VARS2Q5ST30 1063 aaKnown RBP23.91■■□□□ 1.42
TMEM248-207ENST00000607045 PHLDB3Q6NSJ2 640 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 MPZL3Q6UWV2 235 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 SYT2Q8N9I0 419 aaPredicted RBP23.91■■□□□ 1.42
TMEM248-207ENST00000607045 TMEM161BQ8NDZ6 487 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 FOXQ1Q9C009 403 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 C17orf75Q9HAS0 396 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 SLC38A7Q9NVC3 462 aa23.91■■□□□ 1.42
TMEM248-207ENST00000607045 SIT1Q9Y3P8 196 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms