RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 RUFY3Q7L099 469 aa16.56■□□□□ 0.24
SSBP4-214ENST00000607020 MAP4K3Q8IVH8 894 aa16.56■□□□□ 0.24
SSBP4-214ENST00000607020 ING5Q8WYH8 240 aa16.56■□□□□ 0.24
SSBP4-214ENST00000607020 ZSWIM6Q9HCJ5 1215 aa16.56■□□□□ 0.24
SSBP4-214ENST00000607020 CHD8Q9HCK8 2581 aa16.56■□□□□ 0.24
SSBP4-214ENST00000607020 N4BP3O15049 544 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 FCARP24071 287 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 CCR3P51677 355 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 MLLT6P55198 1093 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-214ENST00000607020 SPEM2Q0P670 501 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 CD300LGQ6UXG3 332 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 PIK3AP1Q6ZUJ8 805 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 ANKS3Q6ZW76 656 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 ZNF461Q8TAF7 563 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 POLR3FQ9H1D9 316 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-214ENST00000607020 PDZD7Q9H5P4 517 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 ZFP14Q9HCL3 533 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 SNTG2Q9NY99 539 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 PCDHA12Q9UN75 941 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 CDY1Q9Y6F8 540 aa16.55■□□□□ 0.24
SSBP4-214ENST00000607020 TRAPPC3O43617 180 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 FOXD2O60548 495 aaPredicted RBP16.54■□□□□ 0.24
SSBP4-214ENST00000607020 RECQL4O94761 1208 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 ABLIM3O94929 683 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 PPM1JQ5JR12 505 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 PRSS36Q5K4E3 855 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 SLC8B1Q6J4K2 584 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 IRF7Q92985 503 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 TRMT61BQ9BVS5 477 aaKnown RBP16.54■□□□□ 0.24
SSBP4-214ENST00000607020 CXCL16Q9H2A7 254 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 BRD9Q9H8M2 597 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.54■□□□□ 0.24
SSBP4-214ENST00000607020 MTCL1Q9Y4B5 1905 aaKnown RBP16.54■□□□□ 0.24
SSBP4-214ENST00000607020 F5P12259 2224 aa16.54■□□□□ 0.24
SSBP4-214ENST00000607020 COL4A3Q01955 1670 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 CHD6Q8TD26 2715 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 LRRIQ4A6NIV6 560 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 TTLL13PA6NNM8 815 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 ACKR2O00590 384 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 ZNF197O14709 1029 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 B3GAT3O94766 335 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 CEBPBP17676 345 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 XBP1P17861 261 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 CNR2P34972 360 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 CSRP2Q16527 193 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 FAM78AQ5JUQ0 283 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 ZBTB8OSQ8IWT0 167 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 OXER1Q8TDS5 423 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 FAM3CQ92520 227 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 UROC1Q96N76 676 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 ASB16Q96NS5 453 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 PPP1R10Q96QC0 940 aaKnown RBP16.53■□□□□ 0.24
SSBP4-214ENST00000607020 C2orf40Q9H1Z8 148 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 LMAN1LQ9HAT1 526 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 ZNF334Q9HCZ1 680 aaPredicted RBP16.53■□□□□ 0.24
SSBP4-214ENST00000607020 SEMA4GQ9NTN9 838 aa16.53■□□□□ 0.24
SSBP4-214ENST00000607020 NDRG2Q9UN36 371 aaKnown RBP16.53■□□□□ 0.24
SSBP4-214ENST00000607020 ZFHX4Q86UP3 3567 aa16.52■□□□□ 0.24
SSBP4-214ENST00000607020 EPB41L2O43491 1005 aaKnown RBP16.52■□□□□ 0.24
SSBP4-214ENST00000607020 PAPSS2O95340 614 aaPredicted RBP16.52■□□□□ 0.24
SSBP4-214ENST00000607020 ATF2P15336 505 aa16.52■□□□□ 0.24
SSBP4-214ENST00000607020 IGFBP6P24592 240 aaPredicted RBP16.52■□□□□ 0.24
SSBP4-214ENST00000607020 CXCL12P48061 93 aa16.52■□□□□ 0.24
SSBP4-214ENST00000607020 UPP1Q16831 310 aa16.52■□□□□ 0.24
SSBP4-214ENST00000607020 EARS2Q5JPH6 523 aaKnown RBP16.52■□□□□ 0.24
SSBP4-214ENST00000607020 TCEAL8Q8IYN2 117 aa16.52■□□□□ 0.24
SSBP4-214ENST00000607020 MCPH1Q8NEM0 835 aa16.52■□□□□ 0.24
SSBP4-214ENST00000607020 PIGOQ8TEQ8 1089 aa16.52■□□□□ 0.24
SSBP4-214ENST00000607020 DDX1Q92499 740 aaKnown RBP16.52■□□□□ 0.24
SSBP4-214ENST00000607020 DDX27Q96GQ7 796 aaKnown RBP16.52■□□□□ 0.24
SSBP4-214ENST00000607020 ADPGKQ9BRR6 497 aa16.52■□□□□ 0.24
SSBP4-214ENST00000607020 TRPV4Q9HBA0 871 aa16.52■□□□□ 0.24
SSBP4-214ENST00000607020 MAP1BP46821 2468 aaKnown RBP16.51■□□□□ 0.23
SSBP4-214ENST00000607020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.51■□□□□ 0.23
SSBP4-214ENST00000607020 HRO43593 1189 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 CDKL5O76039 1030 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 LRG1P02750 347 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 CHRNB1P11230 501 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 PSMC3P17980 439 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 TKTP29401 623 aaKnown RBP16.51■□□□□ 0.23
SSBP4-214ENST00000607020 PRPF4BQ13523 1007 aaKnown RBP16.51■□□□□ 0.23
SSBP4-214ENST00000607020 MAPK6Q16659 721 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 PRR23CQ6ZRP0 262 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 SPEM1Q8N4L4 309 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 DEPDC1BQ8WUY9 529 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 SMARCD2Q92925 531 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 MSANTD3Q96H12 275 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 CCDC43Q96MW1 224 aaKnown RBP16.51■□□□□ 0.23
SSBP4-214ENST00000607020 TM6SF1Q9BZW5 370 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 CCDC113Q9H0I3 377 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 GPRC5CQ9NQ84 441 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 MAFFQ9ULX9 164 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
SSBP4-214ENST00000607020 STK36Q9NRP7 1315 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 WDR27A2RRH5 827 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
SSBP4-214ENST00000607020 HOXA6P31267 233 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 ELF1P32519 619 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms