RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 DSG1Q02413 1049 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 CNNM4Q6P4Q7 775 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 STXBP4Q6ZWJ1 553 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 CEP57L1Q8IYX8 460 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 SYCP3Q8IZU3 236 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 CHAMP1Q96JM3 812 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 ZMAT2Q96NC0 199 aaKnown RBP18.06■□□□□ 0.48
LINC00240-203ENST00000606878 NECAB3Q96P71 396 aaPredicted RBP18.06■□□□□ 0.48
LINC00240-203ENST00000606878 TSPAN18Q96SJ8 248 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 RPF1Q9H9Y2 349 aaKnown RBP18.06■□□□□ 0.48
LINC00240-203ENST00000606878 STYXL1Q9Y6J8 313 aa18.06■□□□□ 0.48
LINC00240-203ENST00000606878 TNFRSF10AO00220 468 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 KIF4AO95239 1232 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 ADH1AP07327 375 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 CLCNKBP51801 687 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 ASIC1P78348 528 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 SMAD2Q15796 467 aaKnown RBP18.05■□□□□ 0.48
LINC00240-203ENST00000606878 UPP1Q16831 310 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 TPRNQ4KMQ1 711 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 L1TD1Q5T7N2 865 aaKnown RBP18.05■□□□□ 0.48
LINC00240-203ENST00000606878 FAM171A1Q5VUB5 890 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 SLC39A4Q6P5W5 647 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 SMRP1Q8NCR6 262 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 HASPINQ8TF76 798 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 SLC22A17Q8WUG5 538 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 RIN2Q8WYP3 895 aaPredicted RBP18.05■□□□□ 0.48
LINC00240-203ENST00000606878 TMEM206Q9H813 350 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 RXFP1Q9HBX9 757 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.05■□□□□ 0.48
LINC00240-203ENST00000606878 USP25Q9UHP3 1055 aa18.05■□□□□ 0.48
LINC00240-203ENST00000606878 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.05■□□□□ 0.48
LINC00240-203ENST00000606878 A0A1B0GVL5 298 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 TTC26A0AVF1 554 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 TMEM189-UBE2V1I3L0A0 370 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 SLFN14P0C7P3 912 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 CXCL8P10145 99 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 MYBP10242 640 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 AFMP43652 599 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 PPP2R3AQ06190 1150 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 CEP57Q86XR8 500 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 CD302Q8IX05 232 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 POMGNT1Q8WZA1 660 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 B3GALT6Q96L58 329 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 TTPALQ9BTX7 342 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 GOLGA2P5Q9HBQ8 144 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 PRKAG3Q9UGI9 489 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 SERTAD1Q9UHV2 236 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 AGO2Q9UKV8 859 aaKnown RBP18.04■□□□□ 0.48
LINC00240-203ENST00000606878 REV3LO60673 3130 aa18.04■□□□□ 0.48
LINC00240-203ENST00000606878 TCF20Q9UGU0 1960 aaKnown RBP18.04■□□□□ 0.48
LINC00240-203ENST00000606878 LACTBL1A8MY62 500 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 TEX28O15482 410 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 MEFVO15553 781 aaPredicted RBP18.03■□□□□ 0.48
LINC00240-203ENST00000606878 PRPF6O94906 941 aaKnown RBP18.03■□□□□ 0.48
LINC00240-203ENST00000606878 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
LINC00240-203ENST00000606878 TNFSF9P41273 254 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 POU5F1Q01860 360 aaKnown RBP18.03■□□□□ 0.48
LINC00240-203ENST00000606878 CREMQ03060 361 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 SOX4Q06945 474 aaPredicted RBP18.03■□□□□ 0.48
LINC00240-203ENST00000606878 KCNA1Q09470 495 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 ENOX2Q16206 610 aaKnown RBP18.03■□□□□ 0.48
LINC00240-203ENST00000606878 CES5AQ6NT32 575 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 PDXDC1Q6P996 788 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 SYCE2Q6PIF2 218 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 C18orf25Q96B23 403 aaPredicted RBP18.03■□□□□ 0.48
LINC00240-203ENST00000606878 FAM212AQ96EL1 285 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 KIF12Q96FN5 646 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 S1PR5Q9H228 398 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 BLZF1Q9H2G9 400 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 DZANK1Q9NVP4 752 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 FNIP2Q9P278 1114 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 DPP7Q9UHL4 492 aa18.03■□□□□ 0.48
LINC00240-203ENST00000606878 CPSF3Q9UKF6 684 aaKnown RBP18.03■□□□□ 0.48
LINC00240-203ENST00000606878 BDP1A6H8Y1 2624 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.02■□□□□ 0.48
LINC00240-203ENST00000606878 PVALEFA0A1B0GWK0 134 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 A0A1W2PQ27 194 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 A0A1W2PQ64 194 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 A0A1W2PQD8 194 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 TISP43B9A030 160 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 PODXLO00592 558 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 XPOTO43592 962 aaKnown RBP18.02■□□□□ 0.48
LINC00240-203ENST00000606878 FAM189A1O60320 539 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 C1RP00736 705 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 ADRB2P07550 413 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 PFKFB1P16118 471 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 EPCAMP16422 314 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 CYP3A5P20815 502 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 ACOT2P49753 483 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 CLCN4P51793 760 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 CASP5P51878 434 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 ITIH3Q06033 890 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 SPAG1Q07617 926 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 ZBTB6Q15916 424 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 ZBTB41Q5SVQ8 909 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 ELMSAN1Q6PJG2 1045 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.02■□□□□ 0.48
LINC00240-203ENST00000606878 UNC13DQ70J99 1090 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 GJD3Q8N144 294 aa18.02■□□□□ 0.48
LINC00240-203ENST00000606878 PAGE5Q96GU1 130 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms