RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 DDX20Q9UHI6 824 aaKnown RBP23.28■■□□□ 1.32
USP6NL-204ENST00000606752 GUCA1BQ9UMX6 200 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 PHACTR2O75167 634 aa23.27■■□□□ 1.32
USP6NL-204ENST00000606752 CCSAPQ6IQ19 270 aaPredicted RBP23.27■■□□□ 1.32
USP6NL-204ENST00000606752 PCSK9Q8NBP7 692 aaKnown RBP23.27■■□□□ 1.32
USP6NL-204ENST00000606752 ZNF296Q8WUU4 475 aaPredicted RBP23.27■■□□□ 1.32
USP6NL-204ENST00000606752 SHC3Q92529 594 aa23.27■■□□□ 1.32
USP6NL-204ENST00000606752 WDR24Q96S15 920 aa23.27■■□□□ 1.32
USP6NL-204ENST00000606752 C1orf112Q9NSG2 853 aa23.27■■□□□ 1.32
USP6NL-204ENST00000606752 TRIM10Q9UDY6 481 aa23.27■■□□□ 1.32
USP6NL-204ENST00000606752 TFR2Q9UP52 801 aa23.27■■□□□ 1.32
USP6NL-204ENST00000606752 HOXA11P31270 313 aaPredicted RBP23.26■■□□□ 1.31
USP6NL-204ENST00000606752 TMEM192Q8IY95 271 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 FAM71AQ8IYT1 594 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 SCN10AQ9Y5Y9 1956 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 CXCL8P10145 99 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 CASQ1P31415 396 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 CRYBB1P53674 252 aaPredicted RBP23.26■■□□□ 1.31
USP6NL-204ENST00000606752 PRMT2P55345 433 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 BMS1Q14692 1282 aaKnown RBP23.26■■□□□ 1.31
USP6NL-204ENST00000606752 SNX17Q15036 470 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 ZNF569Q5MCW4 686 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 C10orf76Q5T2E6 689 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 TRAPPC11Q7Z392 1133 aa23.26■■□□□ 1.31
USP6NL-204ENST00000606752 APBB1IPQ7Z5R6 666 aaPredicted RBP23.26■■□□□ 1.31
USP6NL-204ENST00000606752 FANCGO15287 622 aa23.25■■□□□ 1.31
USP6NL-204ENST00000606752 PJA2O43164 708 aa23.25■■□□□ 1.31
USP6NL-204ENST00000606752 MYCNP04198 464 aaPredicted RBP23.25■■□□□ 1.31
USP6NL-204ENST00000606752 NCOA4Q13772 614 aa23.25■■□□□ 1.31
USP6NL-204ENST00000606752 DCAF4L1Q3SXM0 396 aa23.25■■□□□ 1.31
USP6NL-204ENST00000606752 SESTD1Q86VW0 696 aa23.25■■□□□ 1.31
USP6NL-204ENST00000606752 MTMR12Q9C0I1 747 aa23.25■■□□□ 1.31
USP6NL-204ENST00000606752 PCNTO95613 3336 aa23.25■■□□□ 1.31
USP6NL-204ENST00000606752 AXLP30530 894 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 TFAMQ00059 246 aaKnown RBP23.24■■□□□ 1.31
USP6NL-204ENST00000606752 GDF6Q6KF10 455 aaPredicted RBP23.24■■□□□ 1.31
USP6NL-204ENST00000606752 RNF180Q86T96 592 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 SLAIN1Q8ND83 568 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 SYT11Q9BT88 431 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 ASB7Q9H672 318 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 NAGPAQ9UK23 515 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 LACTBL1A8MY62 500 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 TMEM191BP0C7N4 346 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 USP8P40818 1118 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 FAM47CQ5HY64 1035 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 NOTUMQ6P988 496 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 SLC27A1Q6PCB7 646 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 EFCAB13Q8IY85 973 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 TMEM40Q8WWA1 233 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 ELMO3Q96BJ8 720 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 ANKRD36BP1Q96IX9 119 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 ACAP3Q96P50 834 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 DUSP10Q9Y6W6 482 aa23.24■■□□□ 1.31
USP6NL-204ENST00000606752 TRIP12Q14669 1992 aaPredicted RBP23.24■■□□□ 1.31
USP6NL-204ENST00000606752 DDX3XO00571 662 aaKnown RBP eCLIP23.23■■□□□ 1.313e-25■■□□□ 13.7
USP6NL-204ENST00000606752 CST3P01034 146 aaPredicted RBP23.23■■□□□ 1.31
USP6NL-204ENST00000606752 TNNC2P02585 160 aa23.23■■□□□ 1.31
USP6NL-204ENST00000606752 GRM5P41594 1212 aa23.23■■□□□ 1.31
USP6NL-204ENST00000606752 TERF1P54274 439 aa23.23■■□□□ 1.31
USP6NL-204ENST00000606752 NAB2Q15742 525 aa23.23■■□□□ 1.31
USP6NL-204ENST00000606752 ALKBH5Q6P6C2 394 aaKnown RBP23.23■■□□□ 1.31
USP6NL-204ENST00000606752 RSPH3Q86UC2 560 aa23.23■■□□□ 1.31
USP6NL-204ENST00000606752 SLC30A5Q8TAD4 765 aa23.23■■□□□ 1.31
USP6NL-204ENST00000606752 CELF4Q9BZC1 486 aaKnown RBP23.23■■□□□ 1.31
USP6NL-204ENST00000606752 IMPG2Q9BZV3 1241 aa23.23■■□□□ 1.31
USP6NL-204ENST00000606752 INHAP05111 366 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 SLC10A6Q3KNW5 377 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 SLC35F6Q8N357 371 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 APOBEC3GQ9HC16 384 aaKnown RBP23.22■■□□□ 1.31
USP6NL-204ENST00000606752 NENFQ9UMX5 172 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 MEFVO15553 781 aaPredicted RBP23.22■■□□□ 1.31
USP6NL-204ENST00000606752 CABYRO75952 493 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 RPLP2P05387 115 aaKnown RBP23.22■■□□□ 1.31
USP6NL-204ENST00000606752 TNFAIP3P21580 790 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 SPOPLQ6IQ16 392 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 SERINC5Q86VE9 423 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 OLIG1Q8TAK6 271 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 AGPAT1Q99943 283 aa23.22■■□□□ 1.31
USP6NL-204ENST00000606752 CENPFP49454 3210 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 MROH7Q68CQ1 1323 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 M0QZ92 97 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 RIOK3O14730 519 aaKnown RBP23.21■■□□□ 1.31
USP6NL-204ENST00000606752 CYP26A1O43174 497 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 NPTXRO95502 500 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 ASS1P00966 412 aaKnown RBP23.21■■□□□ 1.31
USP6NL-204ENST00000606752 TBXAS1P24557 533 aaPredicted RBP23.21■■□□□ 1.31
USP6NL-204ENST00000606752 GRK4P32298 578 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 NOP14P78316 857 aaKnown RBP23.21■■□□□ 1.31
USP6NL-204ENST00000606752 MRPS6P82932 125 aaKnown RBP23.21■■□□□ 1.31
USP6NL-204ENST00000606752 TRPC3Q13507 836 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 SGSM1Q2NKQ1 1148 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 RPAINQ86UA6 219 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 GLYCTKQ8IVS8 523 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 SECISBP2LQ93073 1101 aaKnown RBP23.21■■□□□ 1.31
USP6NL-204ENST00000606752 CCDC94Q9BW85 323 aaPredicted RBP23.21■■□□□ 1.31
USP6NL-204ENST00000606752 HMX1Q9NP08 348 aaPredicted RBP23.21■■□□□ 1.31
USP6NL-204ENST00000606752 GRIN2DO15399 1336 aa23.21■■□□□ 1.31
USP6NL-204ENST00000606752 THSD7BQ9C0I4 1608 aa23.2■■□□□ 1.31
USP6NL-204ENST00000606752 CUL2Q13617 745 aa23.2■■□□□ 1.3
USP6NL-204ENST00000606752 CD302Q8IX05 232 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms