RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ZSWIM4Q9H7M6 989 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 ZFP14Q9HCL3 533 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 F5P12259 2224 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PATJQ8NI35 1801 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 M0R2N6 131 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 NRG2O14511 850 aaPredicted RBP13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FGFR3P22607 806 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 GLRA2P23416 452 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 GDI1P31150 447 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CEP68Q76N32 757 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 RTL10Q7L3V2 364 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 MAP4K3Q8IVH8 894 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 SPEM1Q8N4L4 309 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FAM160A2Q8N612 972 aaPredicted RBP13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 TCEAL4Q96EI5 215 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FAM20AQ96MK3 541 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 JAKMIP1Q96N16 626 aaKnown RBP13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CORO1BQ9BR76 489 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 NFKBIZQ9BYH8 718 aa13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 ZNF334Q9HCZ1 680 aaPredicted RBP13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 AVENQ9NQS1 362 aaPredicted RBP13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 SH2B1Q9NRF2 756 aaPredicted RBP13.03□□□□□ -0.32
PDLIM1P1-201ENST00000604187 K7ESF4 209 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PRRG1O14668 218 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 RECQL4O94761 1208 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 LRG1P02750 347 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 THP07101 528 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PROS1P07225 676 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CHRNB1P11230 501 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PTPN2P17706 415 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 IGFBP6P24592 240 aaPredicted RBP13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CCNE1P24864 410 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CNR2P34972 360 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ARL2P36404 184 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SF3A2Q15428 464 aaKnown RBP13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 NAB2Q15742 525 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 NPY5RQ15761 445 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CCDC6Q16204 474 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PRSS36Q5K4E3 855 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 VITQ6UXI7 678 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 Q6ZS52 159 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 KRT25Q7Z3Z0 450 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 LONP2Q86WA8 852 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TPH2Q8IWU9 490 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TRIM22Q8IYM9 498 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 C12orf50Q8NA57 414 aaPredicted RBP13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 DAGLBQ8NCG7 672 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 HAS1Q92839 578 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ASB16Q96NS5 453 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 POLR3FQ9H1D9 316 aaPredicted RBP13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TRPV5Q9NQA5 729 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 RBM12Q9NTZ6 932 aaKnown RBP13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SNTG2Q9NY99 539 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 BACE2Q9Y5Z0 518 aa13.02□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ARHGEF37A1IGU5 675 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 WDR27A2RRH5 827 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 I3L4J1 428 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TBX3O15119 743 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MARCH6O60337 910 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 DGAT1O75907 488 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 B3GAT3O94766 335 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 HOXB3P14651 431 aaPredicted RBP13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PSMC3P17980 439 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TKTP29401 623 aaKnown RBP13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 VIPR2P41587 438 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CCR2P41597 374 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 LIMK1P53667 647 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ROR1Q01973 937 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SPIRE1Q08AE8 756 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PTGDRQ13258 359 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 LRRC32Q14392 662 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TMEM132AQ24JP5 1023 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PDZD4Q76G19 769 aaPredicted RBP13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 SMARCD2Q92925 531 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ZSWIM3Q96MP5 696 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CCDC43Q96MW1 224 aaKnown RBP13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PDZD7Q9H5P4 517 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 RXFP3Q9NSD7 469 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ASPMQ8IZT6 3477 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 MYH15Q9Y2K3 1946 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 LRRIQ4A6NIV6 560 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 TTLL13PA6NNM8 815 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ZNF197O14709 1029 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ZNF263O14978 683 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 GCFC2P16383 781 aaKnown RBP13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ELF1P32519 619 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 ARPP19P56211 112 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 GLRA4Q5JXX5 417 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 PPP4R3AQ6IN85 833 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 BLOC1S2Q6QNY1 142 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 NEK8Q86SG6 692 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 DEPDC1BQ8WUY9 529 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 AIFM3Q96NN9 605 aa13□□□□□ -0.33
PDLIM1P1-201ENST00000604187 CYP4F11Q9HBI6 524 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms