RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 KBTBD4Q9NVX7 518 aa12.6□□□□□ -0.39
CCDC12-209ENST00000604164 RCOR1Q9UKL0 485 aa12.6□□□□□ -0.39
CCDC12-209ENST00000604164 REV3LO60673 3130 aa12.6□□□□□ -0.39
CCDC12-209ENST00000604164 BRWD1Q9NSI6 2320 aa12.6□□□□□ -0.39
CCDC12-209ENST00000604164 MYH15Q9Y2K3 1946 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 A0A087X0B3 334 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 A0A0B4J269 797 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 KIF4AO95239 1232 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 GCNT3O95395 438 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 GLUD1P00367 558 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 CLCN4P51793 760 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 PKP1Q13835 747 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 CBX2Q14781 532 aaPredicted RBP12.59□□□□□ -0.39
CCDC12-209ENST00000604164 UPP1Q16831 310 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 ATAT1Q5SQI0 421 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 AXDND1Q5T1B0 1012 aaPredicted RBP12.59□□□□□ -0.39
CCDC12-209ENST00000604164 FAM171A1Q5VUB5 890 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 SYCE2Q6PIF2 218 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 SHC4Q6S5L8 630 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 CYP26C1Q6V0L0 522 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.59□□□□□ -0.39
CCDC12-209ENST00000604164 CEP57L1Q8IYX8 460 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 RIN2Q8WYP3 895 aaPredicted RBP12.59□□□□□ -0.39
CCDC12-209ENST00000604164 SUSD6Q92537 303 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 DHX58Q96C10 678 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 FIZ1Q96SL8 496 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 PHF7Q9BWX1 381 aaPredicted RBP12.59□□□□□ -0.39
CCDC12-209ENST00000604164 S1PR5Q9H228 398 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 PLEKHA4Q9H4M7 779 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 TMEM206Q9H813 350 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 PCDHA7Q9UN72 937 aa12.59□□□□□ -0.39
CCDC12-209ENST00000604164 TCF20Q9UGU0 1960 aaKnown RBP12.59□□□□□ -0.39
CCDC12-209ENST00000604164 FRMD3A2A2Y4 597 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 PODXLO00592 558 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 TEX28O15482 410 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 POLR2DO15514 142 aaKnown RBP12.58□□□□□ -0.4
CCDC12-209ENST00000604164 ALADP13716 330 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 PAX3P23760 479 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 CLCNKBP51801 687 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 RBM10P98175 930 aaKnown RBP12.58□□□□□ -0.4
CCDC12-209ENST00000604164 E2F4Q16254 413 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 SLC10A6Q3KNW5 377 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 ZC2HC1CQ53FD0 456 aaPredicted RBP12.58□□□□□ -0.4
CCDC12-209ENST00000604164 L1TD1Q5T7N2 865 aaKnown RBP12.58□□□□□ -0.4
CCDC12-209ENST00000604164 RESP18Q5W5W9 173 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 ADALQ6DHV7 355 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 CNNM4Q6P4Q7 775 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 ANKS3Q6ZW76 656 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 TAS1R1Q7RTX1 841 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 CEP57Q86XR8 500 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 SYCP3Q8IZU3 236 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 HASPINQ8TF76 798 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 RABGGTAQ92696 567 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 PAAF1Q9BRP4 392 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 C1QTNF1Q9BXJ1 281 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 AGO2Q9UKV8 859 aaKnown RBP12.58□□□□□ -0.4
CCDC12-209ENST00000604164 UBQLN1Q9UMX0 589 aaKnown RBP12.58□□□□□ -0.4
CCDC12-209ENST00000604164 DERAQ9Y315 318 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 NR2E1Q9Y466 385 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 NUB1Q9Y5A7 615 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 STYXL1Q9Y6J8 313 aa12.58□□□□□ -0.4
CCDC12-209ENST00000604164 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 F8W810 466 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 KIAA0391O15091 583 aaKnown RBP12.57□□□□□ -0.4
CCDC12-209ENST00000604164 PPP1R37O75864 691 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 LDHAP00338 332 aaKnown RBP12.57□□□□□ -0.4
CCDC12-209ENST00000604164 CXCL8P10145 99 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 EPCAMP16422 314 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 CYP3A5P20815 502 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 CMA1P23946 247 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 ASIC1P78348 528 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 NUCB2P80303 420 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 PSMD5Q16401 504 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 RARS2Q5T160 578 aaKnown RBP12.57□□□□□ -0.4
CCDC12-209ENST00000604164 C15orf39Q6ZRI6 1047 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 CMASQ8NFW8 434 aaPredicted RBP12.57□□□□□ -0.4
CCDC12-209ENST00000604164 POMGNT1Q8WZA1 660 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 C7orf25Q9BPX7 421 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 STRA6Q9BX79 667 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 TRIM9Q9C026 710 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 ASB7Q9H672 318 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 KCNH3Q9ULD8 1083 aa12.57□□□□□ -0.4
CCDC12-209ENST00000604164 XIRP2A4UGR9 3374 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 ARHGEF37A1IGU5 675 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 H7C4K7 107 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 SYN3O14994 580 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 IL18RAPO95256 599 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 MYL1P05976 194 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 ADRB2P07550 413 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 GARTP22102 1010 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 FGFR3P22607 806 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 SEZ6Q53EL9 994 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 RTP2Q5QGT7 225 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 RTL10Q7L3V2 364 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 APPL2Q8NEU8 664 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms