RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CENPPQ6IPU0 288 aa15.08■□□□□ 0
RNF40-212ENST00000602784 NT5DC4Q86YG4 428 aa15.08■□□□□ 0
RNF40-212ENST00000602784 BRSK2Q8IWQ3 736 aa15.08■□□□□ 0
RNF40-212ENST00000602784 SMYD4Q8IYR2 804 aaPredicted RBP15.08■□□□□ 0
RNF40-212ENST00000602784 ADSSL1Q8N142 457 aa15.08■□□□□ 0
RNF40-212ENST00000602784 SAAL1Q96ER3 474 aa15.08■□□□□ 0
RNF40-212ENST00000602784 DDX27Q96GQ7 796 aaKnown RBP15.08■□□□□ 0
RNF40-212ENST00000602784 TMEM169Q96HH4 297 aa15.08■□□□□ 0
RNF40-212ENST00000602784 DHTKD1Q96HY7 919 aaPredicted RBP15.08■□□□□ 0
RNF40-212ENST00000602784 GAS2L1Q99501 681 aaPredicted RBP15.08■□□□□ 0
RNF40-212ENST00000602784 COLEC11Q9BWP8 271 aa15.08■□□□□ 0
RNF40-212ENST00000602784 PUF60Q9UHX1 559 aaKnown RBP15.08■□□□□ 0
RNF40-212ENST00000602784 C2CD2Q9Y426 696 aa15.08■□□□□ 0
RNF40-212ENST00000602784 RFXAPO00287 272 aa15.07■□□□□ 0
RNF40-212ENST00000602784 NR3C1P04150 777 aa15.07■□□□□ 0
RNF40-212ENST00000602784 PTMSP20962 102 aa15.07■□□□□ 0
RNF40-212ENST00000602784 RPL13P26373 211 aaKnown RBP15.07■□□□□ 0
RNF40-212ENST00000602784 RPL9P32969 192 aaKnown RBP15.07■□□□□ 0
RNF40-212ENST00000602784 PBX3P40426 434 aa15.07■□□□□ 0
RNF40-212ENST00000602784 OR1G1P47890 313 aa15.07■□□□□ 0
RNF40-212ENST00000602784 SURF1Q15526 300 aa15.07■□□□□ 0
RNF40-212ENST00000602784 SNRNP35Q16560 246 aaKnown RBP15.07■□□□□ 0
RNF40-212ENST00000602784 PTPROQ16827 1216 aa15.07■□□□□ 0
RNF40-212ENST00000602784 FOXR2Q6PJQ5 311 aa15.07■□□□□ 0
RNF40-212ENST00000602784 DDX53Q86TM3 631 aaKnown RBP15.07■□□□□ 0
RNF40-212ENST00000602784 ZSWIM2Q8NEG5 633 aa15.07■□□□□ 0
RNF40-212ENST00000602784 GDPD5Q8WTR4 605 aa15.07■□□□□ 0
RNF40-212ENST00000602784 MRPL38Q96DV4 380 aaKnown RBP15.07■□□□□ 0
RNF40-212ENST00000602784 KIF12Q96FN5 646 aa15.07■□□□□ 0
RNF40-212ENST00000602784 ALG13Q9NP73 1137 aaKnown RBP15.07■□□□□ 0
RNF40-212ENST00000602784 RBAKQ9NYW8 714 aaPredicted RBP15.07■□□□□ 0
RNF40-212ENST00000602784 UBQLN1Q9UMX0 589 aaKnown RBP15.07■□□□□ 0
RNF40-212ENST00000602784 GOLGA8IPA6NC78 632 aa15.06■□□□□ 0
RNF40-212ENST00000602784 GOLGA8JA6NMD2 632 aa15.06■□□□□ 0
RNF40-212ENST00000602784 NT5C1B-RDH14C9J2C7 533 aa15.06■□□□□ 0
RNF40-212ENST00000602784 TMEM189-UBE2V1I3L0A0 370 aa15.06■□□□□ 0
RNF40-212ENST00000602784 PSMA7O14818 248 aa15.06■□□□□ 0
RNF40-212ENST00000602784 MAPK13O15264 365 aa15.06■□□□□ 0
RNF40-212ENST00000602784 GRM6O15303 877 aa15.06■□□□□ 0
RNF40-212ENST00000602784 EXOC3O60645 756 aa15.06■□□□□ 0
RNF40-212ENST00000602784 EFEMP2O95967 443 aa15.06■□□□□ 0
RNF40-212ENST00000602784 CYP2J2P51589 502 aa15.06■□□□□ 0
RNF40-212ENST00000602784 ADGRE1Q14246 886 aa15.06■□□□□ 0
RNF40-212ENST00000602784 TMEM132DQ14C87 1099 aa15.06■□□□□ 0
RNF40-212ENST00000602784 UPP1Q16831 310 aa15.06■□□□□ 0
RNF40-212ENST00000602784 ISM2Q6H9L7 571 aa15.06■□□□□ 0
RNF40-212ENST00000602784 JADE1Q6IE81 842 aa15.06■□□□□ 0
RNF40-212ENST00000602784 PDE12Q6L8Q7 609 aaKnown RBP15.06■□□□□ 0
RNF40-212ENST00000602784 DCLRE1AQ6PJP8 1040 aa15.06■□□□□ 0
RNF40-212ENST00000602784 TMEM173Q86WV6 379 aaPredicted RBP15.06■□□□□ 0
RNF40-212ENST00000602784 CBWD2Q8IUF1 395 aa15.06■□□□□ 0
RNF40-212ENST00000602784 FAM212AQ96EL1 285 aa15.06■□□□□ 0
RNF40-212ENST00000602784 MFSD14AQ96MC6 490 aa15.06■□□□□ 0
RNF40-212ENST00000602784 MARCH5Q9NX47 278 aa15.06■□□□□ 0
RNF40-212ENST00000602784 PDCD11Q14690 1871 aaKnown RBP15.06■□□□□ 0
RNF40-212ENST00000602784 CASTOR2A6NHX0 329 aa15.05■□□□□ -0
RNF40-212ENST00000602784 PPP1R3GB7ZBB8 358 aa15.05■□□□□ -0
RNF40-212ENST00000602784 BIN1O00499 593 aa15.05■□□□□ -0
RNF40-212ENST00000602784 PAX3P23760 479 aa15.05■□□□□ -0
RNF40-212ENST00000602784 LRPAP1P30533 357 aa15.05■□□□□ -0
RNF40-212ENST00000602784 LRRC63Q05C16 580 aa15.05■□□□□ -0
RNF40-212ENST00000602784 SOX4Q06945 474 aaPredicted RBP15.05■□□□□ -0
RNF40-212ENST00000602784 CAMK1Q14012 370 aa15.05■□□□□ -0
RNF40-212ENST00000602784 SPATA1Q5VX52 437 aa15.05■□□□□ -0
RNF40-212ENST00000602784 RBM43Q6ZSC3 357 aaKnown RBP15.05■□□□□ -0
RNF40-212ENST00000602784 MLKLQ8NB16 471 aa15.05■□□□□ -0
RNF40-212ENST00000602784 BEST2Q8NFU1 509 aa15.05■□□□□ -0
RNF40-212ENST00000602784 CACTINQ8WUQ7 758 aaKnown RBP15.05■□□□□ -0
RNF40-212ENST00000602784 BCL7CQ8WUZ0 217 aaPredicted RBP15.05■□□□□ -0
RNF40-212ENST00000602784 POF1BQ8WVV4 589 aa15.05■□□□□ -0
RNF40-212ENST00000602784 MYLIPQ8WY64 445 aa15.05■□□□□ -0
RNF40-212ENST00000602784 C18orf25Q96B23 403 aaPredicted RBP15.05■□□□□ -0
RNF40-212ENST00000602784 ADAM28Q9UKQ2 775 aa15.05■□□□□ -0
RNF40-212ENST00000602784 FRMD4BQ9Y2L6 1034 aa15.05■□□□□ -0
RNF40-212ENST00000602784 PRG3Q9Y2Y8 225 aaPredicted RBP15.05■□□□□ -0
RNF40-212ENST00000602784 MTCH2Q9Y6C9 303 aa15.05■□□□□ -0
RNF40-212ENST00000602784 COL4A4P53420 1690 aaPredicted RBP15.04■□□□□ -0
RNF40-212ENST00000602784 TADA2AO75478 443 aa15.04■□□□□ -0
RNF40-212ENST00000602784 NFICP08651 508 aa15.04■□□□□ -0
RNF40-212ENST00000602784 CD44P16070 742 aaKnown RBP15.04■□□□□ -0
RNF40-212ENST00000602784 NR2F2P24468 414 aa15.04■□□□□ -0
RNF40-212ENST00000602784 CCNE1P24864 410 aa15.04■□□□□ -0
RNF40-212ENST00000602784 DNAJB1P25685 340 aa15.04■□□□□ -0
RNF40-212ENST00000602784 CLCNKBP51801 687 aa15.04■□□□□ -0
RNF40-212ENST00000602784 SPAG1Q07617 926 aa15.04■□□□□ -0
RNF40-212ENST00000602784 CYP24A1Q07973 514 aa15.04■□□□□ -0
RNF40-212ENST00000602784 ADAM9Q13443 819 aa15.04■□□□□ -0
RNF40-212ENST00000602784 BMS1Q14692 1282 aaKnown RBP15.04■□□□□ -0
RNF40-212ENST00000602784 PSMD6Q15008 389 aa15.04■□□□□ -0
RNF40-212ENST00000602784 GPR65Q8IYL9 337 aa15.04■□□□□ -0
RNF40-212ENST00000602784 RNF168Q8IYW5 571 aaPredicted RBP15.04■□□□□ -0
RNF40-212ENST00000602784 RDH13Q8NBN7 331 aa15.04■□□□□ -0
RNF40-212ENST00000602784 NOC3LQ8WTT2 800 aaKnown RBP15.04■□□□□ -0
RNF40-212ENST00000602784 TSG101Q99816 390 aa15.04■□□□□ -0
RNF40-212ENST00000602784 PAAF1Q9BRP4 392 aa15.04■□□□□ -0
RNF40-212ENST00000602784 PDE11AQ9HCR9 933 aa15.04■□□□□ -0
RNF40-212ENST00000602784 NGRNQ9NPE2 291 aaKnown RBP15.04■□□□□ -0
RNF40-212ENST00000602784 TLR9Q9NR96 1032 aa15.04■□□□□ -0
RNF40-212ENST00000602784 CDH23Q9H251 3354 aa15.04■□□□□ -0
RNF40-212ENST00000602784 ANK1P16157 1881 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms