RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 HOXC13P31276 330 aa17.74■□□□□ 0.43
SSBP4-211ENST00000601614 SSRP1Q08945 709 aaKnown RBP17.74■□□□□ 0.43
SSBP4-211ENST00000601614 PPP4R3AQ6IN85 833 aa17.74■□□□□ 0.43
SSBP4-211ENST00000601614 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-211ENST00000601614 TPH2Q8IWU9 490 aa17.74■□□□□ 0.43
SSBP4-211ENST00000601614 LMAN1LQ9HAT1 526 aa17.74■□□□□ 0.43
SSBP4-211ENST00000601614 AVENQ9NQS1 362 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-211ENST00000601614 USP20Q9Y2K6 914 aa17.74■□□□□ 0.43
SSBP4-211ENST00000601614 FAM208BQ5VWN6 2430 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 A0A087WWV3 80 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 LRP3O75074 770 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 DEXIO95424 95 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 THP07101 528 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 TKTP29401 623 aaKnown RBP17.73■□□□□ 0.43
SSBP4-211ENST00000601614 CCR2P41597 374 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 NRLP54845 237 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 CSRP2Q16527 193 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 FAM78AQ5JUQ0 283 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 NEK8Q86SG6 692 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 MAP4K3Q8IVH8 894 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 TRIM22Q8IYM9 498 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 DDX27Q96GQ7 796 aaKnown RBP17.73■□□□□ 0.43
SSBP4-211ENST00000601614 POLR3FQ9H1D9 316 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-211ENST00000601614 PDZD7Q9H5P4 517 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 BRD9Q9H8M2 597 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 GPRC5CQ9NQ84 441 aa17.73■□□□□ 0.43
SSBP4-211ENST00000601614 CHURC1-FNTBB4DL54 471 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 I3L4J1 428 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 MAN2B1O00754 1011 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 TBX3O15119 743 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 CCNT1O60563 726 aaKnown RBP17.72■□□□□ 0.43
SSBP4-211ENST00000601614 DGAT1O75907 488 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 EDN1P05305 212 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 CHRNB1P11230 501 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 KCNA4P22459 653 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 PMLP29590 882 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 HSPA4P34932 840 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 FNTBP49356 437 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 CCR3P51677 355 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 ELAVL2Q12926 359 aaKnown RBP17.72■□□□□ 0.43
SSBP4-211ENST00000601614 TOB2Q14106 344 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-211ENST00000601614 SIM2Q14190 667 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-211ENST00000601614 EARS2Q5JPH6 523 aaKnown RBP17.72■□□□□ 0.43
SSBP4-211ENST00000601614 WDR44Q5JSH3 913 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 GALNT17Q6IS24 598 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 VITQ6UXI7 678 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 PPP4R3CPQ6ZMV5 832 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 NOSTRINQ8IVI9 506 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 C3orf58Q8NDZ4 430 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 FAM3CQ92520 227 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 ZSWIM3Q96MP5 696 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
SSBP4-211ENST00000601614 EIF2AK1Q9BQI3 630 aaKnown RBP17.72■□□□□ 0.43
SSBP4-211ENST00000601614 LARP6Q9BRS8 491 aaKnown RBP17.72■□□□□ 0.43
SSBP4-211ENST00000601614 ZNF334Q9HCZ1 680 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-211ENST00000601614 GJB4Q9NTQ9 266 aa17.72■□□□□ 0.43
SSBP4-211ENST00000601614 KIF26AQ9ULI4 1882 aaPredicted RBP17.71■□□□□ 0.43
SSBP4-211ENST00000601614 ARHGEF37A1IGU5 675 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 FAM205CA6NFA0 338 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 DTNBO60941 627 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 GCFC2P16383 781 aaKnown RBP17.71■□□□□ 0.43
SSBP4-211ENST00000601614 RARRES1P49788 294 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 ROR1Q01973 937 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 GLRA4Q5JXX5 417 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 RTL10Q7L3V2 364 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 OXER1Q8TDS5 423 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 ASB16Q96NS5 453 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 HSD17B14Q9BPX1 270 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 CORO1BQ9BR76 489 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 IER2Q9BTL4 223 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 TRMT61BQ9BVS5 477 aaKnown RBP17.71■□□□□ 0.43
SSBP4-211ENST00000601614 FZD8Q9H461 694 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 ZFP14Q9HCL3 533 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 C2orf42Q9NWW7 574 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 BACE2Q9Y5Z0 518 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 PIAS3Q9Y6X2 628 aa17.71■□□□□ 0.43
SSBP4-211ENST00000601614 ATRXP46100 2492 aa17.71■□□□□ 0.42
SSBP4-211ENST00000601614 EML5Q05BV3 1969 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 CCDC194A0A1B0GVG4 234 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 WDR27A2RRH5 827 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 LRRIQ4A6NIV6 560 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 TMEM189-UBE2V1I3L0A0 370 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 LYPLA2O95372 231 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 PTPN2P17706 415 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 GDI1P31150 447 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 BRCC3P46736 316 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 CXCL12P48061 93 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 CLCNKBP51801 687 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 N4BP2L1Q5TBK1 243 aaPredicted RBP17.7■□□□□ 0.42
SSBP4-211ENST00000601614 EEF1DP3Q658K8 133 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 CDCA2Q69YH5 1023 aaPredicted RBP17.7■□□□□ 0.42
SSBP4-211ENST00000601614 PIK3AP1Q6ZUJ8 805 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 MAEAQ7L5Y9 396 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 PIGOQ8TEQ8 1089 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 GOLGA2P5Q9HBQ8 144 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 RBM12Q9NTZ6 932 aaKnown RBP17.7■□□□□ 0.42
SSBP4-211ENST00000601614 ANKEF1Q9NU02 776 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 ANGPTL2Q9UKU9 493 aa17.7■□□□□ 0.42
SSBP4-211ENST00000601614 FRYQ5TBA9 3013 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms