RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 AOPEPQ8N6M6 819 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 C18orf25Q96B23 403 aaPredicted RBP21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 POP1Q99575 1024 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 BPIFA3Q9BQP9 254 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 PBX4Q9BYU1 374 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 CWH43Q9H720 699 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 NRDE2Q9H7Z3 1164 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 SAMSN1Q9NSI8 373 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 NFE2L3Q9Y4A8 694 aa21.71■■□□□ 1.07
SHKBP1-222ENST00000600320 THP07101 528 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 LINC00271P0C7V0 271 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 ZNF165P49910 485 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 GUCY2FP51841 1108 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 MYL5Q02045 173 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 HSP90AA2PQ14568 343 aaPredicted RBP21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 IQCB1Q15051 598 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 TPD52L1Q16890 204 aaPredicted RBP21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 DHX40Q8IX18 779 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 PARD3BQ8TEW8 1205 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 CGRRF1Q99675 332 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 MRPL9Q9BYD2 267 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 NAT10Q9H0A0 1025 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 TSPY26PQ9H489 355 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 GOLGA2P5Q9HBQ8 144 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 CBX8Q9HC52 389 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 KANSL3Q9P2N6 904 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 TUBGCP4Q9UGJ1 667 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 PCDHA11Q9Y5I1 949 aa21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 TDRD15B5MCY1 1934 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-222ENST00000600320 A0A1W2PPC1 479 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 LRRIQ3A6PVS8 624 aaPredicted RBP21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 TRIM49P0CI25 452 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 TRIM49CP0CI26 452 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 DLATP10515 647 aaKnown RBP21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 VAMP7P51809 220 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 DSC1Q08554 894 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 BFSP1Q12934 665 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 TMEM132DQ14C87 1099 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 SURF1Q15526 300 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 CCDC40Q4G0X9 1142 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 HSP90AA4PQ58FG1 418 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 SCARA3Q6AZY7 606 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 SPRED2Q7Z698 418 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 COLGALT2Q8IYK4 626 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 OR5B17Q8NGF7 314 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 TMC2Q8TDI7 906 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 RSPH1Q8WYR4 309 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 ZNF516Q92618 1163 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 THAP9Q9H5L6 903 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 DNAJB4Q9UDY4 337 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 DERAQ9Y315 318 aa21.69■■□□□ 1.06
SHKBP1-222ENST00000600320 CASTOR2A6NHX0 329 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 FGFR1OPO95684 399 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 CA3P07451 260 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 MCCD1P59942 119 aaPredicted RBP21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 TFAMQ00059 246 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 RNASELQ05823 741 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 INTS8Q75QN2 995 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 FIBCD1Q8N539 461 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 CNOT6LQ96LI5 555 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 FNBP1Q96RU3 617 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 PAAF1Q9BRP4 392 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 HSD3B7Q9H2F3 369 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 NKX2-4Q9H2Z4 354 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 INTS13Q9NVM9 706 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 FANCLQ9NW38 375 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 UBQLN1Q9UMX0 589 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 C2CD2Q9Y426 696 aa21.68■■□□□ 1.06
SHKBP1-222ENST00000600320 KIAA1671Q9BY89 1806 aa21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 LINC01553A4QN01 128 aa21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 KRT13P13646 458 aa21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 PBX3P40426 434 aa21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 MARSP56192 900 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 TUSC3Q13454 348 aa21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 FRMD5Q7Z6J6 570 aa21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 WDR49Q8IV35 697 aa21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 RABGGTAQ92696 567 aa21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 MTMR12Q9C0I1 747 aa21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 ARMCX3Q9UH62 379 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-222ENST00000600320 IKBKBO14920 756 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 ZC3H11AO75152 810 aaKnown RBP eCLIP21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 GNA14O95837 355 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 TNNI1P19237 187 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 IGFBP6P24592 240 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 SLC11A1P49279 550 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 CLDN10P78369 228 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 PPP3CAQ08209 521 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 RAB30Q15771 203 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 LRIT3Q3SXY7 679 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 CDKAL1Q5VV42 579 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 LUZP1Q86V48 1076 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 NT5DC4Q86YG4 428 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 TRIM59Q8IWR1 403 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 FAM193BQ96PV7 902 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 TSPAN18Q96SJ8 248 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 METTL14Q9HCE5 456 aaKnown RBP21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 SLC38A7Q9NVC3 462 aa21.66■■□□□ 1.06
SHKBP1-222ENST00000600320 PPEF2O14830 753 aa21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 GALTP07902 379 aa21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 BCAR1P56945 870 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms