RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 EDEM2Q9BV94 578 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 LRRC2Q9BYS8 371 aa19.61■□□□□ 0.73
SSBP4-207ENST00000600244 DHX33Q9H6R0 707 aaKnown RBP19.61■□□□□ 0.73
SSBP4-207ENST00000600244 IGSF10Q6WRI0 2623 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 NCANO14594 1321 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 ZNF263O14978 683 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 CSRP1P21291 193 aaKnown RBP19.6■□□□□ 0.73
SSBP4-207ENST00000600244 CCR2P41597 374 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 RBM25P49756 843 aaKnown RBP19.6■□□□□ 0.73
SSBP4-207ENST00000600244 NPEPPSP55786 919 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 SPIRE1Q08AE8 756 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 TUSC3Q13454 348 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 DAB2IPQ5VWQ8 1189 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 APOA5Q6Q788 366 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 MFSD6LQ8IWD5 586 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 REXO1Q8N1G1 1221 aaKnown RBP19.6■□□□□ 0.73
SSBP4-207ENST00000600244 RNF149Q8NC42 400 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 TRPV4Q9HBA0 871 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 KLK14Q9P0G3 267 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 MTRRQ9UBK8 725 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 NEUROG3Q9Y4Z2 214 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 VWA8A3KMH1 1905 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 ADAMTS20P59510 1910 aa19.6■□□□□ 0.73
SSBP4-207ENST00000600244 ASAP2O43150 1006 aa19.59■□□□□ 0.73
SSBP4-207ENST00000600244 AKAP3O75969 853 aa19.59■□□□□ 0.73
SSBP4-207ENST00000600244 VIPR2P41587 438 aa19.59■□□□□ 0.73
SSBP4-207ENST00000600244 ELAVL2Q12926 359 aaKnown RBP19.59■□□□□ 0.73
SSBP4-207ENST00000600244 TXNDC11Q6PKC3 985 aa19.59■□□□□ 0.73
SSBP4-207ENST00000600244 HACE1Q8IYU2 909 aa19.59■□□□□ 0.73
SSBP4-207ENST00000600244 SLC7A3Q8WY07 619 aa19.59■□□□□ 0.73
SSBP4-207ENST00000600244 C8orf33Q9H7E9 229 aaPredicted RBP19.59■□□□□ 0.73
SSBP4-207ENST00000600244 RBM8AQ9Y5S9 174 aaKnown RBP19.59■□□□□ 0.73
SSBP4-207ENST00000600244 ZNF197O14709 1029 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 EXTL3O43909 919 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 CAPNS1P04632 268 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 FGFR3P22607 806 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 PTENP60484 403 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 CCINQ13939 588 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 AMHR2Q16671 573 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 PFKFB3Q16875 520 aaPredicted RBP19.58■□□□□ 0.72
SSBP4-207ENST00000600244 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.58■□□□□ 0.72
SSBP4-207ENST00000600244 SYNE3Q6ZMZ3 975 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 FERMT3Q86UX7 667 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 SYNPOQ8N3V7 929 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 CORO1BQ9BR76 489 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 C6orf50Q9HD87 102 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 MSRB2Q9Y3D2 182 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 BACE2Q9Y5Z0 518 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 CDY1Q9Y6F8 540 aa19.58■□□□□ 0.72
SSBP4-207ENST00000600244 MAST4O15021 2626 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 MYBPHLA2RUH7 354 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 CASTOR2A6NHX0 329 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 SGSM2O43147 1006 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 MOSPD3O75425 235 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 SOX9P48436 509 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 PXNP49023 591 aaPredicted RBP19.57■□□□□ 0.72
SSBP4-207ENST00000600244 USP11P51784 963 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 PSMC5P62195 406 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 NCBP1Q09161 790 aaKnown RBP19.57■□□□□ 0.72
SSBP4-207ENST00000600244 RTN1Q16799 776 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 PLK5Q496M5 336 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 IFNLR1Q8IU57 520 aaPredicted RBP19.57■□□□□ 0.72
SSBP4-207ENST00000600244 EXOC8Q8IYI6 725 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 TRIM6Q9C030 488 aaPredicted RBP19.57■□□□□ 0.72
SSBP4-207ENST00000600244 LOC400499M0QZD8 3231 aa19.57■□□□□ 0.72
SSBP4-207ENST00000600244 SLC38A8A6NNN8 435 aa19.56■□□□□ 0.72
SSBP4-207ENST00000600244 CCDC192P0DO97 292 aa19.56■□□□□ 0.72
SSBP4-207ENST00000600244 ARF4P18085 180 aaPredicted RBP19.56■□□□□ 0.72
SSBP4-207ENST00000600244 NAB2Q15742 525 aa19.56■□□□□ 0.72
SSBP4-207ENST00000600244 PDZD3Q86UT5 571 aa19.56■□□□□ 0.72
SSBP4-207ENST00000600244 CSGALNACT1Q8TDX6 532 aa19.56■□□□□ 0.72
SSBP4-207ENST00000600244 GPSM3Q9Y4H4 160 aa19.56■□□□□ 0.72
SSBP4-207ENST00000600244 PPME1Q9Y570 386 aa19.56■□□□□ 0.72
SSBP4-207ENST00000600244 LAMA5O15230 3695 aa19.56■□□□□ 0.72
SSBP4-207ENST00000600244 HEPACAM2A8MVW5 462 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 SPECC1L-ADORA2AF8WAN1 911 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 CHADO15335 359 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 HYAL3O43820 417 aaPredicted RBP19.55■□□□□ 0.72
SSBP4-207ENST00000600244 LRG1P02750 347 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 CTHP32929 405 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 RFC5P40937 340 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 KPNA1P52294 538 aaPredicted RBP19.55■□□□□ 0.72
SSBP4-207ENST00000600244 PDCD11Q14690 1871 aaKnown RBP19.55■□□□□ 0.72
SSBP4-207ENST00000600244 RALGPS2Q86X27 583 aaPredicted RBP19.55■□□□□ 0.72
SSBP4-207ENST00000600244 ZNF461Q8TAF7 563 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 TCP11Q8WWU5 503 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 RSPRY1Q96DX4 576 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 CEP170P1Q96L14 293 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 DUSP15Q9H1R2 295 aaPredicted RBP19.55■□□□□ 0.72
SSBP4-207ENST00000600244 PARP2Q9UGN5 583 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 BRPF3Q9ULD4 1205 aa19.55■□□□□ 0.72
SSBP4-207ENST00000600244 LNP1A1A4G5 178 aa19.54■□□□□ 0.72
SSBP4-207ENST00000600244 PTGESO14684 152 aa19.54■□□□□ 0.72
SSBP4-207ENST00000600244 CDC45O75419 566 aa19.54■□□□□ 0.72
SSBP4-207ENST00000600244 ABLIM3O94929 683 aa19.54■□□□□ 0.72
SSBP4-207ENST00000600244 CAVIN2O95810 425 aa19.54■□□□□ 0.72
SSBP4-207ENST00000600244 IGFBP6P24592 240 aaPredicted RBP19.54■□□□□ 0.72
SSBP4-207ENST00000600244 CDC27P30260 824 aa19.54■□□□□ 0.72
SSBP4-207ENST00000600244 MBTD1Q05BQ5 628 aa19.54■□□□□ 0.72
SSBP4-207ENST00000600244 POU5F1BQ06416 359 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms