RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 GRIK3Q13003 919 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 GLRA4Q5JXX5 417 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 JADE1Q6IE81 842 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 FAM117BQ6P1L5 589 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 WDR49Q8IV35 697 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 FAM114A1Q8IWE2 563 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 CMTR2Q8IYT2 770 aaKnown RBP13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 TDHQ8IZJ6 230 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 ABI1Q8IZP0 508 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 SP7Q8TDD2 431 aaPredicted RBP13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 ZNF516Q92618 1163 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 SLC35C1Q96A29 364 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 POP1Q99575 1024 aaKnown RBP13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 RAD9AQ99638 391 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 MRPL9Q9BYD2 267 aaKnown RBP13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 INTS13Q9NVM9 706 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.21
CHMP2A-206ENST00000600118 BECN2A8MW95 431 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 KCNJ18B7U540 433 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 B4GALT3O60512 393 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 DDHD2O94830 711 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 POMCP01189 267 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 THP07101 528 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 TRIM49P0CI25 452 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 TRIM49CP0CI26 452 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 DLATP10515 647 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 EEF1GP26641 437 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 SOX4Q06945 474 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 KCNJ12Q14500 433 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 TMEM132DQ14C87 1099 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 TCP11X2Q5H9J9 407 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 USP37Q86T82 979 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 LRRC43Q8N309 656 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 OR5B17Q8NGF7 314 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 CXorf38Q8TB03 319 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 C18orf25Q96B23 403 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 FNBP1Q96RU3 617 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 YME1L1Q96TA2 773 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 TUBGCP4Q9UGJ1 667 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 UBQLN1Q9UMX0 589 aaKnown RBP13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 INSL6Q9Y581 213 aa13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
CHMP2A-206ENST00000600118 PTPRSQ13332 1948 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 LRRC10BA6NIK2 292 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 GRXCR1A8MXD5 290 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 C4BPAP04003 597 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 LINC00271P0C7V0 271 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 ATP1A3P13637 1013 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 LRPAP1P30533 357 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 GTF2H1P32780 548 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 AP3M2P53677 418 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 PPP3CAQ08209 521 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 TUSC3Q13454 348 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 DUOXA2Q1HG44 320 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 HSP90AA4PQ58FG1 418 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 LMBRD2Q68DH5 695 aaPredicted RBP13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 C15orf39Q6ZRI6 1047 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 APTXQ7Z2E3 356 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 ZNF280BQ86YH2 543 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 MTMR12Q9C0I1 747 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 CWH43Q9H720 699 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 NRDE2Q9H7Z3 1164 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 HCSTQ9UBK5 93 aa13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 LIMA1Q9UHB6 759 aaKnown RBP13.69□□□□□ -0.22
CHMP2A-206ENST00000600118 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 A0A1W2PPC1 479 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 LCHNA4D1U4 455 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 PMM2O15305 246 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 XPOTO43592 962 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 TLL1O43897 1013 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 TNNI1P19237 187 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 GUCY2FP51841 1108 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 RABGGTBP53611 331 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 BTG3Q14201 252 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 KRT31Q15323 416 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 ZACNQ401N2 412 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 PAN2Q504Q3 1202 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 PRPF38BQ5VTL8 546 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 SV2AQ7L0J3 742 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 TRAPPC11Q7Z392 1133 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 TMEM130Q8N3G9 435 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 C1orf127Q8N9H9 656 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 RNF214Q8ND24 703 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 BEST2Q8NFU1 509 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 CACTINQ8WUQ7 758 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 RBSNQ9H1K0 784 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 SIX4Q9UIU6 781 aa13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 PCDHA11Q9Y5I1 949 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms