RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 UPP1Q16831 310 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 SLC10A6Q3KNW5 377 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 FOXD4L6Q3SYB3 417 aaPredicted RBP8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 TPRNQ4KMQ1 711 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 SEZ6Q53EL9 994 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 ZC2HC1CQ53FD0 456 aaPredicted RBP8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 RTP2Q5QGT7 225 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 KIAA1841Q6NSI8 718 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 CD300LGQ6UXG3 332 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 FOXD4L3Q6VB84 417 aaPredicted RBP8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 ZNF720Q7Z2F6 126 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 TMEM87AQ8NBN3 555 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 HASPINQ8TF76 798 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 PIK3R5Q8WYR1 880 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 KHSRPQ92945 711 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 B3GALT6Q96L58 329 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 STRA6Q9BX79 667 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 PANK2Q9BZ23 570 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 SFXN1Q9H9B4 322 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 GOLGA2P5Q9HBQ8 144 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 SLC38A7Q9NVC3 462 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 RCOR1Q9UKL0 485 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 PCDHA7Q9UN72 937 aa8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.71□□□□□ -1.02
CHMP2A-205ENST00000600006 TTC26A0AVF1 554 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 LOC730098B7Z3J9 87 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 OGTO15294 1046 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 B3GAT3O94766 335 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 PAPLNO95428 1278 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 ADRB2P07550 413 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 CXCL8P10145 99 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 IDEP14735 1019 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 FGFR3P22607 806 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 KLRC2P26717 231 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 TNFSF9P41273 254 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 MATR3P43243 847 aaKnown RBP eCLIP8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 ME1P48163 572 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 KRT85P78386 507 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 ITIH3Q06033 890 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 ALCAMQ13740 583 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 ZBTB41Q5SVQ8 909 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 FAM171A1Q5VUB5 890 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 RESP18Q5W5W9 173 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 CNNM4Q6P4Q7 775 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 DCLRE1AQ6PJP8 1040 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 IQUBQ8NA54 791 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 C3orf58Q8NDZ4 430 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 RIN2Q8WYP3 895 aaPredicted RBP8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 DHX58Q96C10 678 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 DDX27Q96GQ7 796 aaKnown RBP8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 FBXL18Q96ME1 805 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 NECTIN4Q96NY8 510 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 TTPALQ9BTX7 342 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 PHF7Q9BWX1 381 aaPredicted RBP8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 TRIM9Q9C026 710 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 LRRC27Q9C0I9 530 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 ADAM7Q9H2U9 754 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 MRPL44Q9H9J2 332 aaKnown RBP8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 PLEKHA5Q9HAU0 1116 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 MAGEF1Q9HAY2 307 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 FNIP2Q9P278 1114 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 CPSF3Q9UKF6 684 aaKnown RBP8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 STYXL1Q9Y6J8 313 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 BDP1A6H8Y1 2624 aa8.7□□□□□ -1.02
CHMP2A-205ENST00000600006 TISP43B9A030 160 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 ANKRD63C9JTQ0 380 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 PODXLO00592 558 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 GCNT3O95395 438 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 GLUD1P00367 558 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 IGFBP6P24592 240 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 LRPAP1P30533 357 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 RPL9P32969 192 aaKnown RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 MTHFRP42898 656 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 CASP5P51878 434 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 PPP2R3AQ06190 1150 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 ZBTB6Q15916 424 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 ENOX2Q16206 610 aaKnown RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 PSMD5Q16401 504 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 HERC4Q5GLZ8 1057 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 RARS2Q5T160 578 aaKnown RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 L1TD1Q5T7N2 865 aaKnown RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 SLFN12LQ6IEE8 588 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 CES5AQ6NT32 575 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 PDXDC1Q6P996 788 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 LILRA6Q6PI73 481 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 PRSS55Q6UWB4 352 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 CCDC65Q8IXS2 484 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 C12orf76Q8N812 135 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 CMASQ8NFW8 434 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 LNX1Q8TBB1 728 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 HDAC7Q8WUI4 952 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 LEO1Q8WVC0 666 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 STAMQ92783 540 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 C18orf25Q96B23 403 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 RIPOR3Q96MK2 946 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 TSPAN18Q96SJ8 248 aa8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 PYM1Q9BRP8 204 aaKnown RBP8.69□□□□□ -1.02
CHMP2A-205ENST00000600006 MSTO1Q9BUK6 570 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms