RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 PRR23D2P0DMB1 279 aaPredicted RBP12.45□□□□□ -0.42
SCN8A-208ENST00000599343 PSMC5P62195 406 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 BTKQ06187 659 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 STX3Q13277 289 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 PKN3Q6P5Z2 889 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 USP6NLQ92738 828 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 SH3GL3Q99963 347 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 THTPAQ9BU02 230 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 SNX12Q9UMY4 172 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
SCN8A-208ENST00000599343 V9GYQ6 96 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 LOC102724159A0A0B4J2E5 919 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 SRP72O76094 671 aaKnown RBP12.45□□□□□ -0.42
SCN8A-208ENST00000599343 UBTFL6P0CB48 400 aaPredicted RBP12.45□□□□□ -0.42
SCN8A-208ENST00000599343 PWP2Q15269 919 aaKnown RBP12.45□□□□□ -0.42
SCN8A-208ENST00000599343 SYNE4Q8N205 404 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 CCT8L2Q96SF2 557 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 STXBP3O00186 592 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 PHF2O75151 1096 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 ANKS3Q6ZW76 656 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 PHF21AQ96BD5 680 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 DCP1AQ9NPI6 582 aaPredicted RBP12.45□□□□□ -0.42
SCN8A-208ENST00000599343 TAP1Q03518 808 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 DCUN1D1Q96GG9 259 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 MRPL1Q9BYD6 325 aaKnown RBP12.45□□□□□ -0.42
SCN8A-208ENST00000599343 RANBP17Q9H2T7 1088 aaKnown RBP12.45□□□□□ -0.42
SCN8A-208ENST00000599343 IL1RL2Q9HB29 575 aa12.45□□□□□ -0.42
SCN8A-208ENST00000599343 XPO1O14980 1071 aaKnown RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 S100A5P33763 92 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 GRIK1P39086 918 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ABCE1P61221 599 aaKnown RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 GPSM2P81274 684 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 FRMD5Q7Z6J6 570 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 C11orf74Q86VG3 221 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 RBM15Q96T37 977 aaKnown RBP eCLIP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 TASP1Q9H6P5 420 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 A0A1W2PQC6 194 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ASMTLO95671 621 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 CDK17Q00537 523 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 TBL3Q12788 808 aaKnown RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 TTLL4Q14679 1199 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 USP10Q14694 798 aaKnown RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 SF3B3Q15393 1217 aaKnown RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 LRRC8BQ6P9F7 803 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 MTHFD1LQ6UB35 978 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ENOSF1Q7L5Y1 443 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 HAUS6Q7Z4H7 955 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 SRLQ86TD4 932 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 RIN2Q8WYP3 895 aaPredicted RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 FAM162AQ96A26 154 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 USP15Q9Y4E8 981 aaPredicted RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 PLEKHG1Q9ULL1 1385 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ADGRA2Q96PE1 1338 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 GUCY1A2P33402 732 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 MTM1Q13496 603 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 DUOXA2Q1HG44 320 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 MMP19Q99542 508 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 KLF6Q99612 283 aaPredicted RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 TMEM117Q9H0C3 514 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 PIDD1Q9HB75 910 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ZC3H7BQ9UGR2 993 aaKnown RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 PPP3CCP48454 512 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 SERPINB4P48594 390 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 CCDC142Q17RM4 750 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 SYTL3Q4VX76 610 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 RCOR2Q8IZ40 523 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 WDR48Q8TAF3 677 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ERP27Q96DN0 273 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 TJP2Q9UDY2 1190 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 FBXO40Q9UH90 709 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ORC4O43929 436 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ECE2O60344 883 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 FKBP9O95302 570 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 HMBSP08397 361 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 BYSLQ13895 437 aaKnown RBP12.44□□□□□ -0.42
SCN8A-208ENST00000599343 FKBP9P1Q75LS8 142 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ADCK2Q7Z695 626 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ASAP3Q8TDY4 903 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 SEC16BQ96JE7 1060 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 RAB6BQ9NRW1 208 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 ARHGEF38Q9NXL2 777 aa12.44□□□□□ -0.42
SCN8A-208ENST00000599343 TRIM66O15016 1216 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 RALAP11233 206 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 METTL16Q86W50 562 aaKnown RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 MASTLQ96GX5 879 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 SH2D3AQ9BRG2 576 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 YIPF2Q9BWQ6 316 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 RGL1Q9NZL6 768 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 SMG5Q9UPR3 1016 aaKnown RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 EIF3HO15372 352 aaKnown RBP eCLIP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 IMPDH2P12268 514 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 SLC1A1P43005 524 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 DNAL1Q4LDG9 190 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 CDR2LQ86X02 465 aaPredicted RBP12.43□□□□□ -0.42
SCN8A-208ENST00000599343 MCEEQ96PE7 176 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 C17orf80Q9BSJ5 609 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 TRPC7Q9HCX4 862 aa12.43□□□□□ -0.42
SCN8A-208ENST00000599343 EXOSC4Q9NPD3 245 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms