RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 RRAGDQ9NQL2 400 aaPredicted RBP25.2■■□□□ 1.62
SYMPK-212ENST00000598896 SNTG2Q9NY99 539 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 AIPL1Q9NZN9 384 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 F8VZ95 297 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 RFX1P22670 979 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 PIK3CAP42336 1068 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 TFAMQ00059 246 aaKnown RBP25.19■■□□□ 1.62
SYMPK-212ENST00000598896 DRAP1Q14919 205 aaPredicted RBP25.19■■□□□ 1.62
SYMPK-212ENST00000598896 HELQQ8TDG4 1101 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 STK33Q9BYT3 514 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 MYO6Q9UM54 1294 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 RALGAPA2Q2PPJ7 1873 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 AP3M2P53677 418 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 ARID5AQ03989 594 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 NFX1Q12986 1120 aaKnown RBP25.19■■□□□ 1.62
SYMPK-212ENST00000598896 DUOXA2Q1HG44 320 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 FAM26DQ5JW98 314 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 FBXO47Q5MNV8 452 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 TRAPPC11Q7Z392 1133 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 APBB1IPQ7Z5R6 666 aaPredicted RBP25.19■■□□□ 1.62
SYMPK-212ENST00000598896 TMEM130Q8N3G9 435 aa25.19■■□□□ 1.62
SYMPK-212ENST00000598896 TRIM6Q9C030 488 aaPredicted RBP25.19■■□□□ 1.62
SYMPK-212ENST00000598896 NHEJ1Q9H9Q4 299 aaPredicted RBP25.19■■□□□ 1.62
SYMPK-212ENST00000598896 GHRP10912 638 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 CKBP12277 381 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 MNX1P50219 401 aaPredicted RBP25.18■■□□□ 1.62
SYMPK-212ENST00000598896 ARHGAP44Q17R89 818 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 JADE1Q6IE81 842 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 CCAR2Q8N163 923 aaKnown RBP25.18■■□□□ 1.62
SYMPK-212ENST00000598896 PPM1KQ8N3J5 372 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 TATDN2Q93075 761 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 KREMEN1Q96MU8 473 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 CCDC94Q9BW85 323 aaPredicted RBP25.18■■□□□ 1.62
SYMPK-212ENST00000598896 CRISPLD2Q9H0B8 497 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 ASB7Q9H672 318 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 TRMT1Q9NXH9 659 aaKnown RBP25.18■■□□□ 1.62
SYMPK-212ENST00000598896 DAAM1Q9Y4D1 1078 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 TRIP11Q15643 1979 aa25.18■■□□□ 1.62
SYMPK-212ENST00000598896 CST3P01034 146 aaPredicted RBP25.17■■□□□ 1.62
SYMPK-212ENST00000598896 NCOA4Q13772 614 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 LPIN1Q14693 890 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 TRAF7Q6Q0C0 670 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 IRF2BP2Q7Z5L9 587 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 FAM126BQ8IXS8 530 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 NT5C1BQ96P26 610 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 TMEM191BP0C7N4 346 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 HSPA1AP0DMV8 641 aaKnown RBP25.17■■□□□ 1.62
SYMPK-212ENST00000598896 HSPA1BP0DMV9 641 aaKnown RBP25.17■■□□□ 1.62
SYMPK-212ENST00000598896 TWF2Q6IBS0 349 aaKnown RBP25.17■■□□□ 1.62
SYMPK-212ENST00000598896 SPOPLQ6IQ16 392 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 U2AF1L4Q8WU68 220 aaKnown RBP25.17■■□□□ 1.62
SYMPK-212ENST00000598896 ERVK-5Q9HDB9 667 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 KCND1Q9NSA2 647 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 SPTLC3Q9NUV7 552 aa25.17■■□□□ 1.62
SYMPK-212ENST00000598896 ZC3H11AO75152 810 aaKnown RBP eCLIP25.16■■□□□ 1.62
SYMPK-212ENST00000598896 CAND2O75155 1236 aa25.16■■□□□ 1.62
SYMPK-212ENST00000598896 PHACTR2O75167 634 aa25.16■■□□□ 1.62
SYMPK-212ENST00000598896 CD52P31358 61 aa25.16■■□□□ 1.62
SYMPK-212ENST00000598896 ASIC2Q16515 512 aa25.16■■□□□ 1.62
SYMPK-212ENST00000598896 ARMC5Q96C12 935 aa25.16■■□□□ 1.62
SYMPK-212ENST00000598896 SNX27Q96L92 541 aa25.16■■□□□ 1.62
SYMPK-212ENST00000598896 APOBEC3GQ9HC16 384 aaKnown RBP25.16■■□□□ 1.62
SYMPK-212ENST00000598896 PADI3Q9ULW8 664 aa25.16■■□□□ 1.62
SYMPK-212ENST00000598896 IPPQ9Y573 584 aa25.16■■□□□ 1.62
SYMPK-212ENST00000598896 RECQL4O94761 1208 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 NDUFA10O95299 355 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 SGPL1O95470 568 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 SERPING1P05155 500 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 AKAP5P24588 427 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 SOX5P35711 763 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 SMG8Q8ND04 991 aaKnown RBP25.15■■□□□ 1.62
SYMPK-212ENST00000598896 ACRBPQ8NEB7 543 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 ANKRD36BP1Q96IX9 119 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 APOL6Q9BWW8 343 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 RNF39Q9H2S5 420 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 PPP2R2CQ9Y2T4 447 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 ADGRG1Q9Y653 693 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 EPN1Q9Y6I3 576 aaPredicted RBP25.15■■□□□ 1.62
SYMPK-212ENST00000598896 FOXN3O00409 490 aaPredicted RBP25.15■■□□□ 1.62
SYMPK-212ENST00000598896 GPR182O15218 404 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 GFPT2O94808 682 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 EIF4A3P38919 411 aaKnown RBP25.15■■□□□ 1.62
SYMPK-212ENST00000598896 STAT1P42224 750 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 ARID3AQ99856 593 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 C1orf112Q9NSG2 853 aa25.15■■□□□ 1.62
SYMPK-212ENST00000598896 TNNC2P02585 160 aa25.14■■□□□ 1.61
SYMPK-212ENST00000598896 MBTPS1Q14703 1052 aa25.14■■□□□ 1.61
SYMPK-212ENST00000598896 TDRD12Q587J7 1177 aaKnown RBP25.14■■□□□ 1.61
SYMPK-212ENST00000598896 C1orf127Q8N9H9 656 aa25.14■■□□□ 1.61
SYMPK-212ENST00000598896 PPP1R13BQ96KQ4 1090 aa25.14■■□□□ 1.61
SYMPK-212ENST00000598896 ZMAT2Q96NC0 199 aaKnown RBP25.14■■□□□ 1.61
SYMPK-212ENST00000598896 SEZ6LQ9BYH1 1024 aa25.14■■□□□ 1.61
SYMPK-212ENST00000598896 SIX4Q9UIU6 781 aa25.14■■□□□ 1.61
SYMPK-212ENST00000598896 REXO2Q9Y3B8 237 aaKnown RBP25.14■■□□□ 1.61
SYMPK-212ENST00000598896 C2CD2Q9Y426 696 aa25.14■■□□□ 1.61
SYMPK-212ENST00000598896 UMODL1Q5DID0 1318 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 EVI5O60447 810 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 CD4P01730 458 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 CTCFP49711 727 aaPredicted RBP25.13■■□□□ 1.61
SYMPK-212ENST00000598896 MYL6P60660 151 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms