RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 BHMT2Q9H2M3 363 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 LRWD1Q9UFC0 647 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 KCNG1Q9UIX4 513 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 TNFSF13BQ9Y275 285 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 CDY1Q9Y6F8 540 aa18.69■□□□□ 0.58
PNKP-210ENST00000597965 TTLL13PA6NNM8 815 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 SP9P0CG40 484 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 ELF1P32519 619 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 CLCNKBP51801 687 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 HMGN5P82970 282 aaKnown RBP18.68■□□□□ 0.58
PNKP-210ENST00000597965 SNW1Q13573 536 aaKnown RBP18.68■□□□□ 0.58
PNKP-210ENST00000597965 ZNF174Q15697 407 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 SLC44A4Q53GD3 710 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 TTC38Q5R3I4 469 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 ZNF461Q8TAF7 563 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 RUBCNQ92622 972 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 DDX23Q9BUQ8 820 aaKnown RBP18.68■□□□□ 0.58
PNKP-210ENST00000597965 AVENQ9NQS1 362 aaPredicted RBP18.68■□□□□ 0.58
PNKP-210ENST00000597965 FBXO4Q9UKT5 387 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 LIMCH1Q9UPQ0 1083 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 MRPS17Q9Y2R5 130 aaKnown RBP18.68■□□□□ 0.58
PNKP-210ENST00000597965 MRPS23Q9Y3D9 190 aaKnown RBP18.68■□□□□ 0.58
PNKP-210ENST00000597965 RBM19Q9Y4C8 960 aaKnown RBP18.68■□□□□ 0.58
PNKP-210ENST00000597965 R4GN57 208 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 MIA3Q5JRA6 1907 aa18.68■□□□□ 0.58
PNKP-210ENST00000597965 VWA8A3KMH1 1905 aa18.67■□□□□ 0.58
PNKP-210ENST00000597965 EP300Q09472 2414 aaPredicted RBP18.67■□□□□ 0.58
PNKP-210ENST00000597965 KINO60870 393 aaKnown RBP18.67■□□□□ 0.58
PNKP-210ENST00000597965 LRG1P02750 347 aa18.67■□□□□ 0.58
PNKP-210ENST00000597965 DMP1Q13316 513 aaPredicted RBP18.67■□□□□ 0.58
PNKP-210ENST00000597965 DRC1Q96MC2 740 aa18.67■□□□□ 0.58
PNKP-210ENST00000597965 MRPL4Q9BYD3 311 aaKnown RBP18.67■□□□□ 0.58
PNKP-210ENST00000597965 FOXQ1Q9C009 403 aa18.67■□□□□ 0.58
PNKP-210ENST00000597965 TMEM134Q9H6X4 195 aa18.67■□□□□ 0.58
PNKP-210ENST00000597965 C17orf75Q9HAS0 396 aa18.67■□□□□ 0.58
PNKP-210ENST00000597965 DOCK6Q96HP0 2047 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 SMIM28A0A1B0GU29 152 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 CCDC169A6NNP5 214 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 H7C4K7 107 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 SYN3O14994 580 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 ADAM12O43184 909 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 LAMTOR5O43504 91 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 ECI2O75521 394 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 PTPN2P17706 415 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 RPL9P32969 192 aaKnown RBP18.66■□□□□ 0.58
PNKP-210ENST00000597965 GRM5P41594 1212 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 NTHL1P78549 312 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 GUCY1B3Q02153 619 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 ZNF568Q3ZCX4 644 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 GLRA4Q5JXX5 417 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 ZBTB41Q5SVQ8 909 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 EEF1DP3Q658K8 133 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 SLC8B1Q6J4K2 584 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 NPAS3Q8IXF0 933 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 FAM184AQ8NB25 1140 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 FBXO18Q8NFZ0 1043 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 ITFG1Q8TB96 612 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 RPP25Q9BUL9 199 aaKnown RBP18.66■□□□□ 0.58
PNKP-210ENST00000597965 SPATA6Q9NWH7 488 aaPredicted RBP18.66■□□□□ 0.58
PNKP-210ENST00000597965 DNMT3BQ9UBC3 853 aaKnown RBP18.66■□□□□ 0.58
PNKP-210ENST00000597965 MAFFQ9ULX9 164 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 KIAA1024Q9UPX6 916 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 DNM3Q9UQ16 869 aa18.66■□□□□ 0.58
PNKP-210ENST00000597965 LAD1O00515 517 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 PRRG1O14668 218 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 ZNF197O14709 1029 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 SPTLC1O15269 473 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 UBXN2BQ14CS0 331 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 NT5DC1Q5TFE4 455 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 KRT79Q5XKE5 535 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 ELMOD1Q8N336 334 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 SECISBP2LQ93073 1101 aaKnown RBP18.65■□□□□ 0.58
PNKP-210ENST00000597965 ACAP3Q96P50 834 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 TCHPQ9BT92 498 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 KIFC3Q9BVG8 833 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 TIPINQ9BVW5 301 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.65■□□□□ 0.58
PNKP-210ENST00000597965 FANCMQ8IYD8 2048 aa18.65■□□□□ 0.58
PNKP-210ENST00000597965 ZNF292O60281 2723 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 ARHGEF37A1IGU5 675 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 FAM170BA6NMN3 283 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 MICAL2O94851 1124 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 RHOP08100 348 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 TKTP29401 623 aaKnown RBP18.64■□□□□ 0.57
PNKP-210ENST00000597965 XKR4Q5GH76 650 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 ZNF852Q6ZMS4 543 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 GPR161Q8N6U8 529 aaKnown RBP18.64■□□□□ 0.57
PNKP-210ENST00000597965 SNX29Q8TEQ0 813 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 ATRIPQ8WXE1 791 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 ELSPBP1Q96BH3 223 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 ZSCAN31Q96LW9 406 aaPredicted RBP18.64■□□□□ 0.57
PNKP-210ENST00000597965 ACO2Q99798 780 aaKnown RBP18.64■□□□□ 0.57
PNKP-210ENST00000597965 KXD1Q9BQD3 176 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 DDX19AQ9NUU7 478 aaKnown RBP18.64■□□□□ 0.57
PNKP-210ENST00000597965 HCFC1R1Q9NWW0 138 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 USP20Q9Y2K6 914 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 NUB1Q9Y5A7 615 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 PCDHGA2Q9Y5H1 932 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 CACNA1IQ9P0X4 2223 aa18.64■□□□□ 0.57
PNKP-210ENST00000597965 DCHS1Q96JQ0 3298 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms