RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ZMAT2Q96NC0 199 aaKnown RBP15.59■□□□□ 0.09
VRK3-213ENST00000597215 PLVAPQ9BX97 442 aa15.59■□□□□ 0.09
VRK3-213ENST00000597215 DNAJB4Q9UDY4 337 aa15.59■□□□□ 0.09
VRK3-213ENST00000597215 MTUS1Q9ULD2 1270 aa15.59■□□□□ 0.09
VRK3-213ENST00000597215 C2CD2Q9Y426 696 aa15.59■□□□□ 0.09
VRK3-213ENST00000597215 TRIM49BA6NDI0 452 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 C5orf67F2Z3F1 127 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 CETN3O15182 167 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 B4GALT3O60512 393 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 LETM1O95202 739 aaPredicted RBP15.58■□□□□ 0.08
VRK3-213ENST00000597215 ALDH2P05091 517 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 GALTP07902 379 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 OR1G1P47890 313 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 SLC11A1P49279 550 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 PMS1P54277 932 aaKnown RBP15.58■□□□□ 0.08
VRK3-213ENST00000597215 FKBP3Q00688 224 aaKnown RBP15.58■□□□□ 0.08
VRK3-213ENST00000597215 CYP24A1Q07973 514 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 TMEM132DQ14C87 1099 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 SURF1Q15526 300 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 NAB2Q15742 525 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 DPCR1Q3MIW9 517 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 JADE1Q6IE81 842 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 SPRED2Q7Z698 418 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 NT5DC4Q86YG4 428 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 FBXO22Q8NEZ5 403 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 ARNTL2Q8WYA1 636 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 UROC1Q96N76 676 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 C11orf84Q9BUA3 381 aaPredicted RBP15.58■□□□□ 0.08
VRK3-213ENST00000597215 CERS4Q9HA82 394 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 ANO10Q9NW15 660 aa15.58■□□□□ 0.08
VRK3-213ENST00000597215 UBQLN1Q9UMX0 589 aaKnown RBP15.58■□□□□ 0.08
VRK3-213ENST00000597215 CHD9Q3L8U1 2897 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 CASTOR2A6NHX0 329 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 TULP1O00294 542 aaPredicted RBP15.57■□□□□ 0.08
VRK3-213ENST00000597215 MAPK13O15264 365 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 NFICP08651 508 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 PSMC2P35998 433 aaKnown RBP15.57■□□□□ 0.08
VRK3-213ENST00000597215 PBX3P40426 434 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 CASP4P49662 377 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 FXR1P51114 621 aaKnown RBP eCLIP15.57■□□□□ 0.08
VRK3-213ENST00000597215 SPAG1Q07617 926 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 PSMD6Q15008 389 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 ZBTB6Q15916 424 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 CT47A1Q5JQC4 288 aaPredicted RBP15.57■□□□□ 0.08
VRK3-213ENST00000597215 TTI2Q6NXR4 508 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 ZC3H3Q8IXZ2 948 aaKnown RBP15.57■□□□□ 0.08
VRK3-213ENST00000597215 BEST2Q8NFU1 509 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 C18orf25Q96B23 403 aaPredicted RBP15.57■□□□□ 0.08
VRK3-213ENST00000597215 MFSD14AQ96MC6 490 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 FNBP1Q96RU3 617 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 MKNK1Q9BUB5 465 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 TTYH1Q9H313 450 aaPredicted RBP15.57■□□□□ 0.08
VRK3-213ENST00000597215 PDE11AQ9HCR9 933 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 SPG21Q9NZD8 308 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 RWDD2AQ9UIY3 292 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 FAN1Q9Y2M0 1017 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 CHD7Q9P2D1 2997 aa15.57■□□□□ 0.08
VRK3-213ENST00000597215 NRP1O14786 923 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 EPB41P11171 864 aaKnown RBP15.56■□□□□ 0.08
VRK3-213ENST00000597215 CYP3A5P20815 502 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 WNT7BP56706 349 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 STX17P56962 302 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 SOX4Q06945 474 aaPredicted RBP15.56■□□□□ 0.08
VRK3-213ENST00000597215 STX1AQ16623 288 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 EFCAB13Q8IY85 973 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 FAM186BQ8IYM0 893 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 SLC39A11Q8N1S5 342 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 KLHL23Q8NBE8 558 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 CACTINQ8WUQ7 758 aaKnown RBP15.56■□□□□ 0.08
VRK3-213ENST00000597215 DDX27Q96GQ7 796 aaKnown RBP15.56■□□□□ 0.08
VRK3-213ENST00000597215 CEP63Q96MT8 703 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 COLEC11Q9BWP8 271 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 GOLGA2P5Q9HBQ8 144 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 TUBGCP4Q9UGJ1 667 aa15.56■□□□□ 0.08
VRK3-213ENST00000597215 PRG3Q9Y2Y8 225 aaPredicted RBP15.56■□□□□ 0.08
VRK3-213ENST00000597215 MYO9BQ13459 2157 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 COL4A4P53420 1690 aaPredicted RBP15.55■□□□□ 0.08
VRK3-213ENST00000597215 NT5C1B-RDH14C9J2C7 533 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 H3BNC9 293 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 SLC16A3O15427 465 aaKnown RBP15.55■□□□□ 0.08
VRK3-213ENST00000597215 AKAP3O75969 853 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 FGF18O76093 207 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 DLATP10515 647 aaKnown RBP15.55■□□□□ 0.08
VRK3-213ENST00000597215 KRT13P13646 458 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 ERCC5P28715 1186 aaPredicted RBP15.55■□□□□ 0.08
VRK3-213ENST00000597215 RPL9P32969 192 aaKnown RBP15.55■□□□□ 0.08
VRK3-213ENST00000597215 KRT17Q04695 432 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 SPATA1Q5VX52 437 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 INTS8Q75QN2 995 aaKnown RBP15.55■□□□□ 0.08
VRK3-213ENST00000597215 USP37Q86T82 979 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 WDR49Q8IV35 697 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 CSGALNACT2Q8N6G5 542 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 TMC2Q8TDI7 906 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 TMEM169Q96HH4 297 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 IGSF21Q96ID5 467 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 ANKRD36BP1Q96IX9 119 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 DUSP9Q99956 384 aaKnown RBP15.55■□□□□ 0.08
VRK3-213ENST00000597215 CACNG4Q9UBN1 327 aa15.55■□□□□ 0.08
VRK3-213ENST00000597215 EPOPA6NHQ4 379 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 PODXLO00592 558 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms