RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 HNRNPA1P09651 372 aaKnown RBP eCLIP17.67■□□□□ 0.42
LIM2-202ENST00000596399 MUTP22033 750 aa17.67■□□□□ 0.42
LIM2-202ENST00000596399 ELAVL2Q12926 359 aaKnown RBP17.67■□□□□ 0.42
LIM2-202ENST00000596399 RAB33AQ14088 237 aa17.67■□□□□ 0.42
LIM2-202ENST00000596399 DCLRE1AQ6PJP8 1040 aa17.67■□□□□ 0.42
LIM2-202ENST00000596399 POTEHQ6S545 545 aa17.67■□□□□ 0.42
LIM2-202ENST00000596399 ADSSL1Q8N142 457 aa17.67■□□□□ 0.42
LIM2-202ENST00000596399 ING5Q8WYH8 240 aa17.67■□□□□ 0.42
LIM2-202ENST00000596399 DDX27Q96GQ7 796 aaKnown RBP17.67■□□□□ 0.42
LIM2-202ENST00000596399 ACO2Q99798 780 aaKnown RBP17.67■□□□□ 0.42
LIM2-202ENST00000596399 TARS2Q9BW92 718 aaKnown RBP17.67■□□□□ 0.42
LIM2-202ENST00000596399 CDT1Q9H211 546 aa17.67■□□□□ 0.42
LIM2-202ENST00000596399 PTPRHQ9HD43 1115 aa17.67■□□□□ 0.42
LIM2-202ENST00000596399 DNMT3BQ9UBC3 853 aaKnown RBP17.67■□□□□ 0.42
LIM2-202ENST00000596399 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
LIM2-202ENST00000596399 TNFSF13BQ9Y275 285 aa17.67■□□□□ 0.42
LIM2-202ENST00000596399 SPTBN4Q9H254 2564 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 SFI1A8K8P3 1242 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 TMEM189-UBE2V1I3L0A0 370 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 GLULP15104 373 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 U2AF2P26368 475 aaKnown RBP eCLIP17.66■□□□□ 0.42
LIM2-202ENST00000596399 TRAPPC10P48553 1259 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 HMGN5P82970 282 aaKnown RBP17.66■□□□□ 0.42
LIM2-202ENST00000596399 RAD51AP2Q09MP3 1159 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 MAPK7Q13164 816 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 PDIA5Q14554 519 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 ALKAL1Q6UXT8 129 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 ZBTB45Q96K62 511 aaPredicted RBP17.66■□□□□ 0.42
LIM2-202ENST00000596399 KXD1Q9BQD3 176 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 MMTAG2Q9BU76 263 aaKnown RBP17.66■□□□□ 0.42
LIM2-202ENST00000596399 SLC2A4RGQ9NR83 387 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 DLGAP2Q9P1A6 1054 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 R4GN57 208 aa17.66■□□□□ 0.42
LIM2-202ENST00000596399 NOTCH4Q99466 2003 aa17.65■□□□□ 0.42
LIM2-202ENST00000596399 RIF1Q5UIP0 2472 aaKnown RBP17.65■□□□□ 0.42
LIM2-202ENST00000596399 PTPRZ1P23471 2315 aaPredicted RBP17.65■□□□□ 0.42
LIM2-202ENST00000596399 HARSP12081 509 aaKnown RBP17.65■□□□□ 0.42
LIM2-202ENST00000596399 GRM5P41594 1212 aa17.65■□□□□ 0.42
LIM2-202ENST00000596399 SNW1Q13573 536 aaKnown RBP17.65■□□□□ 0.42
LIM2-202ENST00000596399 ZRSR1Q15695 479 aaKnown RBP17.65■□□□□ 0.42
LIM2-202ENST00000596399 ZNF568Q3ZCX4 644 aa17.65■□□□□ 0.42
LIM2-202ENST00000596399 SEZ6Q53EL9 994 aa17.65■□□□□ 0.42
LIM2-202ENST00000596399 RINT1Q6NUQ1 792 aa17.65■□□□□ 0.42
LIM2-202ENST00000596399 C18orf25Q96B23 403 aaPredicted RBP17.65■□□□□ 0.42
LIM2-202ENST00000596399 ZSCAN31Q96LW9 406 aaPredicted RBP17.65■□□□□ 0.42
LIM2-202ENST00000596399 DNM3Q9UQ16 869 aa17.65■□□□□ 0.42
LIM2-202ENST00000596399 SIT1Q9Y3P8 196 aa17.65■□□□□ 0.42
LIM2-202ENST00000596399 MYH15Q9Y2K3 1946 aa17.64■□□□□ 0.42
LIM2-202ENST00000596399 DCHS1Q96JQ0 3298 aa17.64■□□□□ 0.42
LIM2-202ENST00000596399 ABLIM1O14639 778 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 SLC16A4O15374 487 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 XYLBO75191 536 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 HOXA9P31269 272 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 SLC5A9Q2M3M2 681 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 XKR4Q5GH76 650 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 PHLDB3Q6NSJ2 640 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 PDXDC1Q6P996 788 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 C1orf186Q6ZWK4 172 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 NPAS3Q8IXF0 933 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 PLIN2Q99541 437 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 KMT5AQ9NQR1 393 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 ARHGAP28Q9P2N2 729 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 MTF2Q9Y483 593 aaPredicted RBP17.64■□□□□ 0.41
LIM2-202ENST00000596399 PHLPP2Q6ZVD8 1323 aa17.64■□□□□ 0.41
LIM2-202ENST00000596399 PODXLO00592 558 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 CD72P21854 359 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 PROZP22891 400 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 YARSP54577 528 aaKnown RBP17.63■□□□□ 0.41
LIM2-202ENST00000596399 ARPP19P56211 112 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 UVSSAQ2YD98 709 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 PABPC1LQ4VXU2 614 aaKnown RBP17.63■□□□□ 0.41
LIM2-202ENST00000596399 KRT79Q5XKE5 535 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 MCRS1Q96EZ8 462 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 SNX27Q96L92 541 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 UROC1Q96N76 676 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 CCDC94Q9BW85 323 aaPredicted RBP17.63■□□□□ 0.41
LIM2-202ENST00000596399 MRPL4Q9BYD3 311 aaKnown RBP17.63■□□□□ 0.41
LIM2-202ENST00000596399 PLA2G2FQ9BZM2 168 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 TMEM134Q9H6X4 195 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 SH2B1Q9NRF2 756 aaPredicted RBP17.63■□□□□ 0.41
LIM2-202ENST00000596399 BACE2Q9Y5Z0 518 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 ZFP37Q9Y6Q3 630 aaPredicted RBP17.63■□□□□ 0.41
LIM2-202ENST00000596399 ZNF292O60281 2723 aa17.63■□□□□ 0.41
LIM2-202ENST00000596399 WDR27A2RRH5 827 aa17.62■□□□□ 0.41
LIM2-202ENST00000596399 NRG2O14511 850 aaPredicted RBP17.62■□□□□ 0.41
LIM2-202ENST00000596399 STARD6P59095 220 aa17.62■□□□□ 0.41
LIM2-202ENST00000596399 ROR1Q01973 937 aa17.62■□□□□ 0.41
LIM2-202ENST00000596399 DMP1Q13316 513 aaPredicted RBP17.62■□□□□ 0.41
LIM2-202ENST00000596399 VARS2Q5ST30 1063 aaKnown RBP17.62■□□□□ 0.41
LIM2-202ENST00000596399 ANKS3Q6ZW76 656 aa17.62■□□□□ 0.41
LIM2-202ENST00000596399 PJA1Q8NG27 643 aa17.62■□□□□ 0.41
LIM2-202ENST00000596399 PNMA5Q96PV4 448 aa17.62■□□□□ 0.41
LIM2-202ENST00000596399 TCHPQ9BT92 498 aa17.62■□□□□ 0.41
LIM2-202ENST00000596399 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.62■□□□□ 0.41
LIM2-202ENST00000596399 FAM186AA6NE01 2351 aa17.61■□□□□ 0.41
LIM2-202ENST00000596399 NPHP3-ACAD11A0A0J9YXS1 232 aa17.61■□□□□ 0.41
LIM2-202ENST00000596399 TRAPPC3O43617 180 aa17.61■□□□□ 0.41
LIM2-202ENST00000596399 EIF5BO60841 1220 aaKnown RBP17.61■□□□□ 0.41
LIM2-202ENST00000596399 SEC24AO95486 1093 aa17.61■□□□□ 0.41
LIM2-202ENST00000596399 RHOP08100 348 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms