RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TKTP29401 623 aaKnown RBP10.99□□□□□ -0.65
LIG1-209ENST00000596104 MAGEA9P43362 315 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 CSTF1Q05048 431 aaKnown RBP10.99□□□□□ -0.65
LIG1-209ENST00000596104 FZD5Q13467 585 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 ME3Q16798 604 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 SLC5A9Q2M3M2 681 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 GLRA4Q5JXX5 417 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
LIG1-209ENST00000596104 ZBTB41Q5SVQ8 909 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 TPRG1Q6ZUI0 275 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 C3orf58Q8NDZ4 430 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 NACC1Q96RE7 527 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 ADPGKQ9BRR6 497 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 POLR3CQ9BUI4 534 aaPredicted RBP10.99□□□□□ -0.65
LIG1-209ENST00000596104 KIFC3Q9BVG8 833 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 PLA2G2FQ9BZM2 168 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 AVENQ9NQS1 362 aaPredicted RBP10.99□□□□□ -0.65
LIG1-209ENST00000596104 GDE1Q9NZC3 331 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 GDAQ9Y2T3 454 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 MRPS23Q9Y3D9 190 aaKnown RBP10.99□□□□□ -0.65
LIG1-209ENST00000596104 CDY1Q9Y6F8 540 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 ARHGEF37A1IGU5 675 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 JAK2O60674 1132 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 CEBPBP17676 345 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 RPA1P27694 616 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 RPS9P46781 194 aaKnown RBP10.98□□□□□ -0.65
LIG1-209ENST00000596104 CLCNKBP51801 687 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 ANKRD1Q15327 319 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 UPP1Q16831 310 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 TMEM132AQ24JP5 1023 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 RSPO4Q2I0M5 234 aaPredicted RBP10.98□□□□□ -0.65
LIG1-209ENST00000596104 DCAF4L1Q3SXM0 396 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 NT5DC1Q5TFE4 455 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 SLC8B1Q6J4K2 584 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 PADI6Q6TGC4 694 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 ANKS3Q6ZW76 656 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 DEPTORQ8TB45 409 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 GTF3C6Q969F1 213 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 MCRS1Q96EZ8 462 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 NELL2Q99435 816 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 EPC1Q9H2F5 836 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 GOLGA2P5Q9HBQ8 144 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 PRMT8Q9NR22 394 aaPredicted RBP10.98□□□□□ -0.65
LIG1-209ENST00000596104 ZSCAN32Q9NX65 697 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 DAXXQ9UER7 740 aaPredicted RBP10.98□□□□□ -0.65
LIG1-209ENST00000596104 FRYLO94915 3013 aa10.98□□□□□ -0.65
LIG1-209ENST00000596104 TDRD15B5MCY1 1934 aaKnown RBP10.97□□□□□ -0.65
LIG1-209ENST00000596104 ARHGEF35A5YM69 484 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 I3L4J1 428 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 TBC1D4O60343 1298 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 ABLIM3O94929 683 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 LIG1P18858 919 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 TGM1P22735 817 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 FCARP24071 287 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 MCM7P33993 719 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 BRCC3P46736 316 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 FOSBP53539 338 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 ANAPC15P60006 121 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 ROR1Q01973 937 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 SOX4Q06945 474 aaPredicted RBP10.97□□□□□ -0.65
LIG1-209ENST00000596104 PPP2R5AQ15172 486 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 XKR4Q5GH76 650 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 PRSS36Q5K4E3 855 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 ATF7IP2Q5U623 682 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 TANGO2Q6ICL3 276 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 ZNF852Q6ZMS4 543 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 CEP120Q8N960 986 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 ZNF461Q8TAF7 563 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 ATRIPQ8WXE1 791 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 ELSPBP1Q96BH3 223 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 UROC1Q96N76 676 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 HEBP1Q9NRV9 189 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 NCDNQ9UBB6 729 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 SMG5Q9UPR3 1016 aaKnown RBP10.97□□□□□ -0.65
LIG1-209ENST00000596104 MTCL1Q9Y4B5 1905 aaKnown RBP10.97□□□□□ -0.65
LIG1-209ENST00000596104 DOCK6Q96HP0 2047 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 DNAH14Q0VDD8 3507 aa10.97□□□□□ -0.65
LIG1-209ENST00000596104 FANCMQ8IYD8 2048 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 SMIM28A0A1B0GU29 152 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 WDR27A2RRH5 827 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 NRG2O14511 850 aaPredicted RBP10.96□□□□□ -0.65
LIG1-209ENST00000596104 NCAM2O15394 837 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 TRAPPC3O43617 180 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 TDGF1P13385 188 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 GRM5P41594 1212 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 EFNA5P52803 228 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 ADCY1Q08828 1119 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 ST3GAL1Q11201 340 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 ECM1Q16610 540 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 TSSK4Q6SA08 328 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 ALKAL1Q6UXT8 129 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
LIG1-209ENST00000596104 DNASE1L2Q92874 299 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 TCEAL4Q96EI5 215 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 ZMAT2Q96NC0 199 aaKnown RBP10.96□□□□□ -0.65
LIG1-209ENST00000596104 CDT1Q9H211 546 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 POLD4Q9HCU8 107 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 TNFSF13BQ9Y275 285 aa10.96□□□□□ -0.65
LIG1-209ENST00000596104 MRPS17Q9Y2R5 130 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms