RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GCLMP48507 274 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 MYL7Q01449 175 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 POU5F1Q01860 360 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 PPP3CAQ08209 521 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 RBL2Q08999 1139 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 FBXO47Q5MNV8 452 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 BRSK2Q8IWQ3 736 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 FAM126BQ8IXS8 530 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 EHBP1Q8NDI1 1231 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 IQCDQ96DY2 449 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 POP1Q99575 1024 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 LSM14BQ9BX40 385 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 PDE11AQ9HCR9 933 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 CHST12Q9NRB3 414 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 SIK3Q9Y2K2 1263 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 SQORQ9Y6N5 450 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 TRANK1O15050 2925 aa14.14□□□□□ -0.15
SHKBP1-209ENST00000595803 DCDC2CA8MYV0 355 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 FAM189A1O60320 539 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 IL18RAPO95256 599 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 CD4P01730 458 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 TRIM21P19474 475 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 GRM5P41594 1212 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 KLK7P49862 253 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 AP3M2P53677 418 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 PAK2Q13177 524 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 SKIV2LQ15477 1246 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 TSR1Q2NL82 804 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 C1orf220Q5T0J3 134 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 RASIP1Q5U651 963 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 KRT39Q6A163 491 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 CEP120Q8N960 986 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 CCDC150Q8NCX0 1101 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 ZNF397Q8NF99 534 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 TMEM117Q9H0C3 514 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 TMEM8AQ9HCN3 771 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 TMEM39AQ9NV64 488 aa14.13□□□□□ -0.15
SHKBP1-209ENST00000595803 PMM2O15305 246 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 PHACTR2O75167 634 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 GHRP10912 638 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 SLC9A1P19634 815 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 PON1P27169 355 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 CASP14P31944 242 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 MXI1P50539 228 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 YARSP54577 528 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 CLDN10P78369 228 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 NHLH1Q02575 133 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 LPIN1Q14693 890 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 CBWD6Q4V339 395 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 FIGNQ5HY92 759 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 CBWD3Q5JTY5 395 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 CBWD5Q5RIA9 395 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 TWF2Q6IBS0 349 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 SV2AQ7L0J3 742 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 CACNA2D4Q7Z3S7 1137 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 CD302Q8IX05 232 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 CGRRF1Q99675 332 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 EIF2AQ9BY44 585 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 EDEM3Q9BZQ6 932 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 NKX2-4Q9H2Z4 354 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 ERVK-5Q9HDB9 667 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 FAM207AQ9NSI2 230 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 PADI3Q9ULW8 664 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 CAPN11Q9UMQ6 739 aa14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 LUC7L2Q9Y383 392 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-209ENST00000595803 LACTBL1A8MY62 500 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 NRDCO43847 1150 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 C4BPAP04003 597 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 SELPP16109 830 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 CD52P31358 61 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 ADKP55263 362 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 BIRC3Q13489 604 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 RAB30Q15771 203 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 ENOX2Q16206 610 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 DUOXA2Q1HG44 320 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 HS1BP3Q53T59 392 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 TMEM240Q5SV17 173 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 UBXN11Q5T124 520 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 LRRC8DQ7L1W4 858 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 ANKRD33Q7Z3H0 272 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 WDR49Q8IV35 697 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 CNGA4Q8IV77 575 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 TMEM192Q8IY95 271 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 HACE1Q8IYU2 909 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 CACTINQ8WUQ7 758 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 ZNF516Q92618 1163 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 TOX2Q96NM4 488 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 INTS2Q9H0H0 1204 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 ASB7Q9H672 318 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 AGO3Q9H9G7 860 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 PLEKHA5Q9HAU0 1116 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 PLCB1Q9NQ66 1216 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 TOPORSQ9NS56 1045 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 SNTG2Q9NY99 539 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 GCNT4Q9P109 453 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 MSRAQ9UJ68 235 aa14.11□□□□□ -0.15
SHKBP1-209ENST00000595803 GBF1Q92538 1859 aa14.1□□□□□ -0.15
SHKBP1-209ENST00000595803 A0A1W2PQJ5 194 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms