RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NEU2Q9Y3R4 380 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 MAGEB2O15479 319 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 ADRB2P07550 413 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 JAG1P78504 1218 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 LACTBP83111 547 aaPredicted RBP14.12□□□□□ -0.15
VRK3-209ENST00000594948 ACCSLQ4AC99 568 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 SLC27A3Q5K4L6 730 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 RGS9BPQ6ZS82 235 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 USP37Q86T82 979 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 CPNE8Q86YQ8 564 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 MGARPQ8TDB4 240 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 NSMCE1Q8WV22 266 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 SEMA4DQ92854 862 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 C8orf37Q96NL8 207 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 POP1Q99575 1024 aaKnown RBP14.12□□□□□ -0.15
VRK3-209ENST00000594948 KCNK9Q9NPC2 374 aa14.12□□□□□ -0.15
VRK3-209ENST00000594948 CREB1P16220 341 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 MSH2P43246 934 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 IL9RQ01113 521 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 MYO1EQ12965 1108 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 CCNG2Q16589 344 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 PARP6Q2NL67 630 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 SPDYAQ5MJ70 313 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 OTUD6AQ7L8S5 288 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 TDRPQ86YL5 185 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 KIAA0825Q8IV33 1275 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 FITM2Q8N6M3 262 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 CCDC89Q8N998 374 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 FBF1Q8TES7 1133 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 DHX38Q92620 1227 aaKnown RBP14.11□□□□□ -0.15
VRK3-209ENST00000594948 CNKSR1Q969H4 720 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 CHST7Q9NS84 486 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 TXLNGQ9NUQ3 528 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 ANAPC7Q9UJX3 599 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 TISP43B9A030 160 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 LIN7AO14910 233 aaPredicted RBP14.11□□□□□ -0.15
VRK3-209ENST00000594948 PSTPIP1O43586 416 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 KRT16P08779 473 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 UNGP13051 313 aaPredicted RBP14.11□□□□□ -0.15
VRK3-209ENST00000594948 TAC1P20366 129 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 HMGB2P26583 209 aaKnown RBP14.11□□□□□ -0.15
VRK3-209ENST00000594948 QARSP47897 775 aaKnown RBP14.11□□□□□ -0.15
VRK3-209ENST00000594948 HSD17B4P51659 736 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 GHRHRQ02643 423 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 GCNT1Q02742 428 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 KLF1Q13351 362 aaPredicted RBP14.11□□□□□ -0.15
VRK3-209ENST00000594948 MPP2Q14168 576 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 SNRNP35Q16560 246 aaKnown RBP14.11□□□□□ -0.15
VRK3-209ENST00000594948 KYNUQ16719 465 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 CGB2Q6NT52 195 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 MCOLN2Q8IZK6 566 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 ANKRD42Q8N9B4 389 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 FBXL13Q8NEE6 735 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 DDX27Q96GQ7 796 aaKnown RBP14.11□□□□□ -0.15
VRK3-209ENST00000594948 MFSD14AQ96MC6 490 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 FBXL18Q96ME1 805 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 PPCSQ9HAB8 311 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 CHORDC1Q9UHD1 332 aaPredicted RBP14.11□□□□□ -0.15
VRK3-209ENST00000594948 NAALADL1Q9UQQ1 740 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 STARD13Q9Y3M8 1113 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 PCDHAC2Q9Y5I4 1007 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 ZHX2Q9Y6X8 837 aa14.11□□□□□ -0.15
VRK3-209ENST00000594948 UNC5CO95185 931 aa14.1□□□□□ -0.15
VRK3-209ENST00000594948 ADCY8P40145 1251 aa14.1□□□□□ -0.15
VRK3-209ENST00000594948 RBM5P52756 815 aaKnown RBP eCLIP14.1□□□□□ -0.15
VRK3-209ENST00000594948 ATP11AP98196 1134 aa14.1□□□□□ -0.15
VRK3-209ENST00000594948 SNX1Q13596 522 aa14.1□□□□□ -0.15
VRK3-209ENST00000594948 PPP1R2P3Q6NXS1 205 aa14.1□□□□□ -0.15
VRK3-209ENST00000594948 CCDC174Q6PII3 467 aa14.1□□□□□ -0.15
VRK3-209ENST00000594948 RAB20Q9NX57 234 aa14.1□□□□□ -0.15
VRK3-209ENST00000594948 CTNNAL1Q9UBT7 734 aa14.1□□□□□ -0.15
VRK3-209ENST00000594948 MROH7Q68CQ1 1323 aa14.1□□□□□ -0.15
VRK3-209ENST00000594948 FAM47DPA6NHR8 397 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 NDC80O14777 642 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 DHX15O43143 795 aaKnown RBP14.09□□□□□ -0.15
VRK3-209ENST00000594948 PRPF4O43172 522 aaKnown RBP eCLIP14.09□□□□□ -0.15
VRK3-209ENST00000594948 PROSCO94903 275 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 SCP2P22307 547 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 PSEN1P49768 467 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 BPIFB4P59827 614 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 UBXN2AP68543 259 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
VRK3-209ENST00000594948 RASA2Q15283 850 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 AOC3Q16853 763 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 NSMFQ6X4W1 530 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 ZNF365Q70YC5 407 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 MAP4K3Q8IVH8 894 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 C4orf19Q8IY42 314 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 SPICE1Q8N0Z3 855 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 AGGF1Q8N302 714 aaeCLIP14.09□□□□□ -0.15
VRK3-209ENST00000594948 ZCCHC9Q8N567 271 aaKnown RBP14.09□□□□□ -0.15
VRK3-209ENST00000594948 MAML1Q92585 1016 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 TTC25Q96NG3 672 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 TMEM237Q96Q45 408 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 ANKEF1Q9NU02 776 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 SENP1Q9P0U3 644 aa14.09□□□□□ -0.15
VRK3-209ENST00000594948 FAM170AA1A519 330 aa14.08□□□□□ -0.15
VRK3-209ENST00000594948 RPSAP08865 295 aaKnown RBP14.08□□□□□ -0.15
VRK3-209ENST00000594948 CHRM1P11229 460 aaPredicted RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms