RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 RDH13Q8NBN7 331 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 ZSWIM2Q8NEG5 633 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 KIFAP3Q92845 792 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 PCYT2Q99447 389 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 GORASP1Q9BQQ3 440 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.48■□□□□ 0.23
PNKP-204ENST00000594661 MROH8Q9H579 483 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 PCDHGA4Q9Y5G9 962 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 ADGRA3Q8IWK6 1321 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 IGKV6D-21A0A0A0MT36 114 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 NPTXRO95502 500 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 GGPS1O95749 300 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 OATP04181 439 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 TRIM49P0CI25 452 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 TRIM49CP0CI26 452 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 SUDS3Q9H7L9 328 aaPredicted RBP16.48■□□□□ 0.23
PNKP-204ENST00000594661 LUC7LQ9NQ29 371 aaKnown RBP16.48■□□□□ 0.23
PNKP-204ENST00000594661 GCNT4Q9P109 453 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 PNMA3Q9UL41 463 aa16.48■□□□□ 0.23
PNKP-204ENST00000594661 UNCXA6NJT0 531 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 BTBD19C9JJ37 291 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 PDHXO00330 501 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 ZSCAN9O15535 394 aaPredicted RBP16.47■□□□□ 0.23
PNKP-204ENST00000594661 MYBPC2Q14324 1141 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 SLC18A3Q16572 532 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 RRAGCQ9HB90 399 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 SIX2Q9NPC8 291 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 KMT5AQ9NQR1 393 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 SALL4Q9UJQ4 1053 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 TBX20Q9UMR3 447 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 ZNFX1Q9P2E3 1918 aaKnown RBP16.47■□□□□ 0.23
PNKP-204ENST00000594661 MCM3APO60318 1980 aa16.47■□□□□ 0.23
PNKP-204ENST00000594661 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 DENND3A2RUS2 1198 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 ATP2C2O75185 946 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 TGFB3P10600 412 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 DRD4P21917 467 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 CCL15Q16663 113 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 C8orf74Q6P047 294 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 FBXO16Q8IX29 292 aaPredicted RBP16.46■□□□□ 0.23
PNKP-204ENST00000594661 C12orf56Q8IXR9 622 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 SLC17A8Q8NDX2 589 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 SPIRE2Q8WWL2 714 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 PLEKHG4BQ96PX9 1271 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 OSBPL1AQ9BXW6 950 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 POLR3FQ9H1D9 316 aaPredicted RBP16.46■□□□□ 0.23
PNKP-204ENST00000594661 GBA2Q9HCG7 927 aaPredicted RBP16.46■□□□□ 0.23
PNKP-204ENST00000594661 HSPBP1Q9NZL4 362 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 ADAMTS1Q9UHI8 967 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 AJAP1Q9UKB5 411 aaPredicted RBP16.46■□□□□ 0.23
PNKP-204ENST00000594661 ASB3Q9Y575 518 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 A0A087X0T9 212 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 GTPBP10A4D1E9 387 aaKnown RBP16.46■□□□□ 0.23
PNKP-204ENST00000594661 ANKRD63C9JTQ0 380 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 BUB1O43683 1085 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 CLTAP09496 248 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 FAM153BP0C7A2 387 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 FAM228BP0C875 321 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 CETPP11597 493 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 RANBP1P43487 201 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 FMO5P49326 533 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 BFSP1Q12934 665 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 EMC2Q15006 297 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 FAM153CQ494X1 144 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 CBWD6Q4V339 395 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 CBWD3Q5JTY5 395 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 CBWD5Q5RIA9 395 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 METTL7BQ6UX53 244 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 MAATS1Q7Z4T9 603 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 MAP4K3Q8IVH8 894 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 WHAMMQ8TF30 809 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 TMEM174Q8WUU8 243 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 RAPGEF5Q92565 580 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 RBM41Q96IZ5 413 aaKnown RBP16.46■□□□□ 0.23
PNKP-204ENST00000594661 NOX5Q96PH1 765 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 NTPCRQ9BSD7 190 aaKnown RBP16.46■□□□□ 0.23
PNKP-204ENST00000594661 C17orf75Q9HAS0 396 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 FAM153AQ9UHL3 310 aa16.46■□□□□ 0.23
PNKP-204ENST00000594661 SMIM24O75264 130 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 CNGA1P29973 690 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 TCF7P36402 384 aaPredicted RBP16.45■□□□□ 0.22
PNKP-204ENST00000594661 GTF2A2P52657 109 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 POLGP54098 1239 aaPredicted RBP16.45■□□□□ 0.22
PNKP-204ENST00000594661 RNF10Q8N5U6 811 aaKnown RBP16.45■□□□□ 0.22
PNKP-204ENST00000594661 DTNBP1Q96EV8 351 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 BICD1Q96G01 975 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 MPHOSPH6Q99547 160 aaKnown RBP16.45■□□□□ 0.22
PNKP-204ENST00000594661 CELF2O95319 508 aaKnown RBP16.45■□□□□ 0.22
PNKP-204ENST00000594661 TCP1P17987 556 aaKnown RBP16.45■□□□□ 0.22
PNKP-204ENST00000594661 ADSSP30520 456 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 HPDP32754 393 aaPredicted RBP16.45■□□□□ 0.22
PNKP-204ENST00000594661 HSPA9P38646 679 aaKnown RBP16.45■□□□□ 0.22
PNKP-204ENST00000594661 RTP1P59025 263 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 DLG4P78352 724 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 PTK2Q05397 1052 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 BIRC3Q13489 604 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms