RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 CACNG4Q9UBN1 327 aa18.94■□□□□ 0.62
IRF3-208ENST00000594387 ATP6V1DQ9Y5K8 247 aa18.94■□□□□ 0.62
IRF3-208ENST00000594387 VWA8A3KMH1 1905 aa18.94■□□□□ 0.62
IRF3-208ENST00000594387 MYMKA6NI61 221 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 TMEM189-UBE2V1I3L0A0 370 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 OGTO15294 1046 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 C1RP00736 705 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 KCNE1P15382 129 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 RPL9P32969 192 aaKnown RBP18.93■□□□□ 0.62
IRF3-208ENST00000594387 PPP2R3AQ06190 1150 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 NAB2Q15742 525 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 XKR4Q5GH76 650 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 HERC4Q5GLZ8 1057 aaPredicted RBP18.93■□□□□ 0.62
IRF3-208ENST00000594387 SFR1Q86XK3 245 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 PALB2Q86YC2 1186 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 GLYCTKQ8IVS8 523 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 CCDC65Q8IXS2 484 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 B3GALT6Q96L58 329 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 MSTO1Q9BUK6 570 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 CXCL16Q9H2A7 254 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 ST6GALNAC4Q9H4F1 302 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 RPF1Q9H9Y2 349 aaKnown RBP18.93■□□□□ 0.62
IRF3-208ENST00000594387 CNTN3Q9P232 1028 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 NUB1Q9Y5A7 615 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 PCDHB13Q9Y5F0 798 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 C2orf16Q68DN1 1984 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 TTC28Q96AY4 2481 aa18.93■□□□□ 0.62
IRF3-208ENST00000594387 ABLIM1O14639 778 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 EFEMP2O95967 443 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 PIGRP01833 764 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 ALCAMQ13740 583 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 POSTNQ15063 836 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 PSMD5Q16401 504 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 UPP1Q16831 310 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 SEZ6Q53EL9 994 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.92■□□□□ 0.62
IRF3-208ENST00000594387 STXBP4Q6ZWJ1 553 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 ZNF720Q7Z2F6 126 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 CD302Q8IX05 232 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 SYCP3Q8IZU3 236 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 C12orf76Q8N812 135 aaPredicted RBP18.92■□□□□ 0.62
IRF3-208ENST00000594387 HDAC7Q8WUI4 952 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 TSPAN18Q96SJ8 248 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 PYM1Q9BRP8 204 aaKnown RBP18.92■□□□□ 0.62
IRF3-208ENST00000594387 TNMDQ9H2S6 317 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 PLEKHA4Q9H4M7 779 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 MAN1C1Q9NR34 630 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 PANK4Q9NVE7 773 aa18.92■□□□□ 0.62
IRF3-208ENST00000594387 ANK1P16157 1881 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 PI4K2BG5E9Z4 385 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 PODXLO00592 558 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 DCXO43602 365 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 GCNT3O95395 438 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 SLC10A6Q3KNW5 377 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 ZC2HC1CQ53FD0 456 aaPredicted RBP18.91■□□□□ 0.62
IRF3-208ENST00000594387 ADALQ6DHV7 355 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 TMC5Q6UXY8 1006 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 MAP4K3Q8IVH8 894 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 DHX58Q96C10 678 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 FAM212AQ96EL1 285 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 ACCSQ96QU6 501 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 EPHX3Q9H6B9 360 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 GOLGA2P5Q9HBQ8 144 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 TSHZ2Q9NRE2 1034 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 TBC1D7Q9P0N9 293 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 MYO10Q9HD67 2058 aa18.91■□□□□ 0.62
IRF3-208ENST00000594387 CXCL8P10145 99 aa18.9■□□□□ 0.62
IRF3-208ENST00000594387 DNM1Q05193 864 aaKnown RBP18.9■□□□□ 0.62
IRF3-208ENST00000594387 RTP2Q5QGT7 225 aa18.9■□□□□ 0.62
IRF3-208ENST00000594387 PRSS55Q6UWB4 352 aaPredicted RBP18.9■□□□□ 0.62
IRF3-208ENST00000594387 CYP26C1Q6V0L0 522 aa18.9■□□□□ 0.62
IRF3-208ENST00000594387 RNF135Q8IUD6 432 aa18.9■□□□□ 0.62
IRF3-208ENST00000594387 PIK3R5Q8WYR1 880 aa18.9■□□□□ 0.62
IRF3-208ENST00000594387 POMGNT1Q8WZA1 660 aa18.9■□□□□ 0.62
IRF3-208ENST00000594387 KIF12Q96FN5 646 aa18.9■□□□□ 0.62
IRF3-208ENST00000594387 MAGEF1Q9HAY2 307 aa18.9■□□□□ 0.62
IRF3-208ENST00000594387 PIDD1Q9HB75 910 aa18.9■□□□□ 0.62
IRF3-208ENST00000594387 UBQLN1Q9UMX0 589 aaKnown RBP18.9■□□□□ 0.62
IRF3-208ENST00000594387 A0A0B4J269 797 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 LOC730098B7Z3J9 87 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 TULP1O00294 542 aaPredicted RBP18.89■□□□□ 0.61
IRF3-208ENST00000594387 RPL17P18621 184 aaKnown RBP18.89■□□□□ 0.61
IRF3-208ENST00000594387 MCM4P33991 863 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 KRT85P78386 507 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 TMEM31Q5JXX7 168 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 C15orf39Q6ZRI6 1047 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 ANKS3Q6ZW76 656 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 GPR149Q86SP6 731 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 DNAJC19Q96DA6 116 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 ZMAT2Q96NC0 199 aaKnown RBP18.89■□□□□ 0.61
IRF3-208ENST00000594387 OLFML3Q9NRN5 406 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 AGO2Q9UKV8 859 aaKnown RBP18.89■□□□□ 0.61
IRF3-208ENST00000594387 PCDHA7Q9UN72 937 aa18.89■□□□□ 0.61
IRF3-208ENST00000594387 A0A0C4DFX4 3053 aa18.88■□□□□ 0.61
IRF3-208ENST00000594387 A0A087X0B3 334 aa18.88■□□□□ 0.61
IRF3-208ENST00000594387 CCDC195A0A1B0GUA6 201 aa18.88■□□□□ 0.61
IRF3-208ENST00000594387 H7C4K7 107 aa18.88■□□□□ 0.61
IRF3-208ENST00000594387 TGM5O43548 720 aa18.88■□□□□ 0.61
IRF3-208ENST00000594387 WEE2P0C1S8 567 aa18.88■□□□□ 0.61
IRF3-208ENST00000594387 SPATA31D3P0C874 917 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms