RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 PTPN14Q15678 1187 aa15.86■□□□□ 0.13
VRK3-206ENST00000594090 KRBA2Q6ZNG9 492 aa15.86■□□□□ 0.13
VRK3-206ENST00000594090 EFHBQ8N7U6 833 aa15.86■□□□□ 0.13
VRK3-206ENST00000594090 HASPINQ8TF76 798 aa15.86■□□□□ 0.13
VRK3-206ENST00000594090 UROC1Q96N76 676 aa15.86■□□□□ 0.13
VRK3-206ENST00000594090 CDCA3Q99618 268 aaPredicted RBP15.86■□□□□ 0.13
VRK3-206ENST00000594090 RPF1Q9H9Y2 349 aaKnown RBP15.86■□□□□ 0.13
VRK3-206ENST00000594090 IRAK3Q9Y616 596 aa15.86■□□□□ 0.13
VRK3-206ENST00000594090 ANK1P16157 1881 aa15.86■□□□□ 0.13
VRK3-206ENST00000594090 FSD2A1L4K1 749 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 TBX10O75333 385 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 TADA2AO75478 443 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 URODP06132 367 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 ADRB2P07550 413 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 PRR29P0C7W0 189 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 HOXD13P35453 343 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 LTBRP36941 435 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 ACOT2P49753 483 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 CLCNKBP51801 687 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 ADAM15Q13444 863 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 UPP1Q16831 310 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 AAK1Q2M2I8 961 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 EP400NLQ6ZTU2 488 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 TAS1R1Q7RTX1 841 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 FMR1NBQ8N0W7 255 aaPredicted RBP15.85■□□□□ 0.13
VRK3-206ENST00000594090 C18orf25Q96B23 403 aaPredicted RBP15.85■□□□□ 0.13
VRK3-206ENST00000594090 ASB2Q96Q27 587 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 GPR62Q9BZJ7 368 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 SLC39A2Q9NP94 309 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 EXOC1Q9NV70 894 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 SF3B1O75533 1304 aaKnown RBP eCLIP15.85■□□□□ 0.133e-6■■■■■ 137.9
VRK3-206ENST00000594090 LACTBL1A8MY62 500 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 TMEM189-UBE2V1I3L0A0 370 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 GLP2RO95838 553 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 GARTP22102 1010 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 DLX2Q07687 328 aaPredicted RBP15.85■□□□□ 0.13
VRK3-206ENST00000594090 KMT5BQ4FZB7 885 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 ARMCX5Q6P1M9 558 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 C3orf58Q8NDZ4 430 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 VN1R2Q8NFZ6 395 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 ZNF507Q8TCN5 953 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 SCFD1Q8WVM8 642 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 KIF12Q96FN5 646 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 CBWD1Q9BRT8 395 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 MRPL17Q9NRX2 175 aaKnown RBP15.85■□□□□ 0.13
VRK3-206ENST00000594090 TUBGCP4Q9UGJ1 667 aa15.85■□□□□ 0.13
VRK3-206ENST00000594090 H3BQ06 376 aaPredicted RBP15.84■□□□□ 0.13
VRK3-206ENST00000594090 LILRB3O75022 631 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 B3GAT3O94766 335 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 GLUD2P49448 558 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 NDUFV1P49821 464 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 KCNQ1P51787 676 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 RBM10P98175 930 aaKnown RBP15.84■□□□□ 0.13
VRK3-206ENST00000594090 POU5F1Q01860 360 aaKnown RBP15.84■□□□□ 0.13
VRK3-206ENST00000594090 DSG1Q02413 1049 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 SPAG1Q07617 926 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 SNW1Q13573 536 aaKnown RBP15.84■□□□□ 0.13
VRK3-206ENST00000594090 KCNC3Q14003 757 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 BMT2Q1RMZ1 405 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 LEXMQ3ZCV2 418 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 DCLRE1AQ6PJP8 1040 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 CRELD2Q6UXH1 353 aaPredicted RBP15.84■□□□□ 0.13
VRK3-206ENST00000594090 ZSWIM2Q8NEG5 633 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 FAM212AQ96EL1 285 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 DDX27Q96GQ7 796 aaKnown RBP15.84■□□□□ 0.13
VRK3-206ENST00000594090 CHST7Q9NS84 486 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 SSX2IPQ9Y2D8 614 aa15.84■□□□□ 0.13
VRK3-206ENST00000594090 SPTBN5Q9NRC6 3674 aaKnown RBP15.83■□□□□ 0.12
VRK3-206ENST00000594090 PODXLO00592 558 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 C2CD2LO14523 706 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 CLASP2O75122 1294 aaKnown RBP15.83■□□□□ 0.12
VRK3-206ENST00000594090 RPN1P04843 607 aaKnown RBP15.83■□□□□ 0.12
VRK3-206ENST00000594090 IGFBP6P24592 240 aaPredicted RBP15.83■□□□□ 0.12
VRK3-206ENST00000594090 FAM160A1Q05DH4 1040 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 DPYDQ12882 1025 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 ELAVL2Q12926 359 aaKnown RBP15.83■□□□□ 0.12
VRK3-206ENST00000594090 PSMD2Q13200 908 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 ZBTB6Q15916 424 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 USP41Q3LFD5 358 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 TJAP1Q5JTD0 557 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 KIAA0319Q5VV43 1072 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 JADE1Q6IE81 842 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 KANK3Q6NY19 840 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 CD302Q8IX05 232 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 NELFCDQ8IXH7 590 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 TMEM87AQ8NBN3 555 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 KIAA0895Q8NCT3 520 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 ENGASEQ8NFI3 743 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 SAAL1Q96ER3 474 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 B3GALT6Q96L58 329 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 TSPAN18Q96SJ8 248 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 FAM213AQ9BRX8 229 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 EMILIN2Q9BXX0 1053 aa15.83■□□□□ 0.12
VRK3-206ENST00000594090 BARX2Q9UMQ3 279 aaPredicted RBP15.83■□□□□ 0.12
VRK3-206ENST00000594090 UBQLN1Q9UMX0 589 aaKnown RBP15.83■□□□□ 0.12
VRK3-206ENST00000594090 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.83■□□□□ 0.12
VRK3-206ENST00000594090 KIAA0391O15091 583 aaKnown RBP15.82■□□□□ 0.12
VRK3-206ENST00000594090 TGFB1I1O43294 461 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 XPOTO43592 962 aaKnown RBP15.82■□□□□ 0.12
VRK3-206ENST00000594090 LDHAP00338 332 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms