RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 COG5Q9UP83 839 aa20.29■□□□□ 0.84
TCF3-216ENST00000592395 TTC26A0AVF1 554 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 EFEMP2O95967 443 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 RPN1P04843 607 aaKnown RBP20.28■□□□□ 0.84
TCF3-216ENST00000592395 CTSAP10619 480 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 POU5F1Q01860 360 aaKnown RBP20.28■□□□□ 0.84
TCF3-216ENST00000592395 HYAL1Q12794 435 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 PSMD2Q13200 908 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 SNW1Q13573 536 aaKnown RBP20.28■□□□□ 0.84
TCF3-216ENST00000592395 ENOX2Q16206 610 aaKnown RBP20.28■□□□□ 0.84
TCF3-216ENST00000592395 TMEM87AQ8NBN3 555 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 ENGASEQ8NFI3 743 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 SCFD1Q8WVM8 642 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 RABGGTAQ92696 567 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 CCDC47Q96A33 483 aaKnown RBP20.28■□□□□ 0.84
TCF3-216ENST00000592395 PAAF1Q9BRP4 392 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 SLC39A2Q9NP94 309 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 ADAM28Q9UKQ2 775 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.28■□□□□ 0.84
TCF3-216ENST00000592395 ANK1P16157 1881 aa20.28■□□□□ 0.84
TCF3-216ENST00000592395 FSD2A1L4K1 749 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 F8W810 466 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 SOD2P04179 222 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 ADRB2P07550 413 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 HOXD13P35453 343 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 DPYDQ12882 1025 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 COL19A1Q14993 1142 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 BMT2Q1RMZ1 405 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 FUT10Q6P4F1 479 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.27■□□□□ 0.84
TCF3-216ENST00000592395 CD302Q8IX05 232 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 RNF168Q8IYW5 571 aaPredicted RBP20.27■□□□□ 0.84
TCF3-216ENST00000592395 MRPL43Q8N983 215 aaKnown RBP20.27■□□□□ 0.84
TCF3-216ENST00000592395 HLA-CQ95604 372 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 PABPC5Q96DU9 382 aaKnown RBP20.27■□□□□ 0.84
TCF3-216ENST00000592395 IPO9Q96P70 1041 aaKnown RBP20.27■□□□□ 0.84
TCF3-216ENST00000592395 TSPAN18Q96SJ8 248 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 CDCA3Q99618 268 aaPredicted RBP20.27■□□□□ 0.84
TCF3-216ENST00000592395 HERC2P3Q9BVR0 1158 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 TLE6Q9H808 572 aa20.27■□□□□ 0.84
TCF3-216ENST00000592395 LACTBL1A8MY62 500 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 TMEM189-UBE2V1I3L0A0 370 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 KIAA0391O15091 583 aaKnown RBP20.26■□□□□ 0.83
TCF3-216ENST00000592395 TADA2AO75478 443 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 KIF4AO95239 1232 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 LDHAP00338 332 aaKnown RBP20.26■□□□□ 0.83
TCF3-216ENST00000592395 NRIP1P48552 1158 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 ACOT2P49753 483 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 SOX4Q06945 474 aaPredicted RBP20.26■□□□□ 0.83
TCF3-216ENST00000592395 UPP1Q16831 310 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 ARMCX5Q6P1M9 558 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 DDX27Q96GQ7 796 aaKnown RBP20.26■□□□□ 0.83
TCF3-216ENST00000592395 TIGD1Q96MW7 591 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 CBWD1Q9BRT8 395 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 GOLGA2P5Q9HBQ8 144 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 IRAK3Q9Y616 596 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 PRUNE2Q8WUY3 3088 aa20.26■□□□□ 0.83
TCF3-216ENST00000592395 SF3B1O75533 1304 aaKnown RBP eCLIP20.26■□□□□ 0.831e-7■■■■■ 143.8
TCF3-216ENST00000592395 C2orf71A6NGG8 1288 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 HIDE1A8MVS5 230 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 XPOTO43592 962 aaKnown RBP20.25■□□□□ 0.83
TCF3-216ENST00000592395 CXCL14O95715 111 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 CA8P35219 290 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 GTF2F1P35269 517 aaKnown RBP eCLIP20.25■□□□□ 0.83
TCF3-216ENST00000592395 CLCNKBP51801 687 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 SNRPFP62306 86 aaKnown RBP20.25■□□□□ 0.83
TCF3-216ENST00000592395 STK4Q13043 487 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 DUSP6Q16828 381 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 DCLRE1AQ6PJP8 1040 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 CRELD2Q6UXH1 353 aaPredicted RBP20.25■□□□□ 0.83
TCF3-216ENST00000592395 RBM23Q86U06 439 aaKnown RBP20.25■□□□□ 0.83
TCF3-216ENST00000592395 NELFCDQ8IXH7 590 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 EFHBQ8N7U6 833 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 KIAA0895Q8NCT3 520 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 C18orf25Q96B23 403 aaPredicted RBP20.25■□□□□ 0.83
TCF3-216ENST00000592395 IGFLR1Q9H665 355 aa20.25■□□□□ 0.83
TCF3-216ENST00000592395 UBE2ZQ9H832 354 aaPredicted RBP20.25■□□□□ 0.83
TCF3-216ENST00000592395 UBQLN1Q9UMX0 589 aaKnown RBP20.25■□□□□ 0.83
TCF3-216ENST00000592395 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.24■□□□□ 0.83
TCF3-216ENST00000592395 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.24■□□□□ 0.83
TCF3-216ENST00000592395 PER2O15055 1255 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 GADD45BO75293 160 aaPredicted RBP20.24■□□□□ 0.83
TCF3-216ENST00000592395 RHOBTB3O94955 611 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 URODP06132 367 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 RPL9P32969 192 aaKnown RBP20.24■□□□□ 0.83
TCF3-216ENST00000592395 ELAVL2Q12926 359 aaKnown RBP20.24■□□□□ 0.83
TCF3-216ENST00000592395 KCNB1Q14721 858 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 PTPN14Q15678 1187 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 ZBTB6Q15916 424 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 CTC1Q2NKJ3 1217 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 HASPINQ8TF76 798 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 ATXN2LQ8WWM7 1075 aaKnown RBP20.24■□□□□ 0.83
TCF3-216ENST00000592395 AUTS2Q8WXX7 1259 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 SAAL1Q96ER3 474 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 FAM213AQ9BRX8 229 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 GPR62Q9BZJ7 368 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 ASB7Q9H672 318 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 MRPL17Q9NRX2 175 aaKnown RBP20.24■□□□□ 0.83
TCF3-216ENST00000592395 CLDND1Q9NY35 253 aa20.24■□□□□ 0.83
TCF3-216ENST00000592395 HOOK1Q9UJC3 728 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms