RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 CXCL8P10145 99 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 CREMQ03060 361 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 ELAVL2Q12926 359 aaKnown RBP16.6■□□□□ 0.25
ERCC1-213ENST00000592023 PSMD5Q16401 504 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 ALKAL1Q6UXT8 129 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 CCDC73Q6ZRK6 1079 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 PALB2Q86YC2 1186 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 PDILTQ8N807 584 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 C3orf58Q8NDZ4 430 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 DDX12PQ92771 950 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 KCNN1Q92952 543 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 FIZ1Q96SL8 496 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 TTPALQ9BTX7 342 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 PANK2Q9BZ23 570 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 SLC38A7Q9NVC3 462 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 BDP1A6H8Y1 2624 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 MYMKA6NI61 221 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 I3L4J1 428 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 PODXLO00592 558 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 PIGRP01833 764 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 SPATA31D3P0C874 917 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 KCNE1P15382 129 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 TNFSF9P41273 254 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 BRCC3P46736 316 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 PKP1Q13835 747 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 UPP1Q16831 310 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 ZC2HC1CQ53FD0 456 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-213ENST00000592023 HERC4Q5GLZ8 1057 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-213ENST00000592023 ATAT1Q5SQI0 421 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-213ENST00000592023 SPATA31D4Q6ZUB0 917 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 SV2BQ7L1I2 683 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 MAP4K3Q8IVH8 894 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 GPR65Q8IYL9 337 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 C18orf25Q96B23 403 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-213ENST00000592023 LRFN3Q9BTN0 628 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 FNIP2Q9P278 1114 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 C5orf42Q9H799 3197 aa16.59■□□□□ 0.25
ERCC1-213ENST00000592023 C2CD4DB7Z1M9 353 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 TGM5O43548 720 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 PPP6R2O75170 966 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 YEATS4O95619 227 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 CLTAP09496 248 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 COL9A1P20849 921 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 SCP2P22307 547 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 SPAG1Q07617 926 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 SLC10A6Q3KNW5 377 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 ZBTB41Q5SVQ8 909 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 SLC39A4Q6P5W5 647 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 ELMSAN1Q6PJG2 1045 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 DCLRE1AQ6PJP8 1040 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 GPR149Q86SP6 731 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 TUBGCP4Q9UGJ1 667 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 NR2E1Q9Y466 385 aa16.58■□□□□ 0.24
ERCC1-213ENST00000592023 TISP43B9A030 160 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 GPR37L1O60883 481 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 RFPL2O75678 378 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 IDEP14735 1019 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 TKTP29401 623 aaKnown RBP16.57■□□□□ 0.24
ERCC1-213ENST00000592023 GTF2BQ00403 316 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 PPP2R3AQ06190 1150 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 CD300LGQ6UXG3 332 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 CCDC149Q6ZUS6 474 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 TDRD5Q8NAT2 981 aaKnown RBP16.57■□□□□ 0.24
ERCC1-213ENST00000592023 LNX1Q8TBB1 728 aaPredicted RBP16.57■□□□□ 0.24
ERCC1-213ENST00000592023 DNAJC19Q96DA6 116 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 DDX27Q96GQ7 796 aaKnown RBP16.57■□□□□ 0.24
ERCC1-213ENST00000592023 MSTO1Q9BUK6 570 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 TBC1D7Q9P0N9 293 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 DPP7Q9UHL4 492 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 RAPGEFL1Q9UHV5 662 aa16.57■□□□□ 0.24
ERCC1-213ENST00000592023 OGTO15294 1046 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 ADAM12O43184 909 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
ERCC1-213ENST00000592023 GAP43P17677 238 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 FGFR3P22607 806 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 ABCD1P33897 745 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 PDXDC1Q6P996 788 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 C15orf39Q6ZRI6 1047 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 TMEM130Q8N3G9 435 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 KREMEN2Q8NCW0 462 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 CMASQ8NFW8 434 aaPredicted RBP16.56■□□□□ 0.24
ERCC1-213ENST00000592023 KIF12Q96FN5 646 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 CLSTN3Q9BQT9 956 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 IKZF4Q9H2S9 585 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 MRPL44Q9H9J2 332 aaKnown RBP16.56■□□□□ 0.24
ERCC1-213ENST00000592023 SEL1LQ9UBV2 794 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 FBXW11Q9UKB1 542 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 NUB1Q9Y5A7 615 aa16.56■□□□□ 0.24
ERCC1-213ENST00000592023 MTCL1Q9Y4B5 1905 aaKnown RBP16.55■□□□□ 0.24
ERCC1-213ENST00000592023 A0A0B4J269 797 aa16.55■□□□□ 0.24
ERCC1-213ENST00000592023 CCDC195A0A1B0GUA6 201 aa16.55■□□□□ 0.24
ERCC1-213ENST00000592023 TTC26A0AVF1 554 aa16.55■□□□□ 0.24
ERCC1-213ENST00000592023 PRR33A8MZF0 331 aa16.55■□□□□ 0.24
ERCC1-213ENST00000592023 ANKRD63C9JTQ0 380 aa16.55■□□□□ 0.24
ERCC1-213ENST00000592023 TRAPPC3O43617 180 aa16.55■□□□□ 0.24
ERCC1-213ENST00000592023 FAM189A1O60320 539 aa16.55■□□□□ 0.24
ERCC1-213ENST00000592023 CUTAO60888 179 aa16.55■□□□□ 0.24
ERCC1-213ENST00000592023 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms