RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 SREBF1P36956 1147 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 MAPK8P45983 427 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 PDE1AP54750 535 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 PRKCEQ02156 737 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 FCHO2Q0JRZ9 810 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 LMAN2Q12907 356 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 HSP90AA2PQ14568 343 aaPredicted RBP7.22□□□□□ -1.25
DNMT1-222ENST00000590619 MTERF2Q49AM1 385 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 CYP4A22Q5TCH4 519 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 TYW1BQ6NUM6 668 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 PDXDC1Q6P996 788 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 CWC27Q6UX04 472 aaKnown RBP7.22□□□□□ -1.25
DNMT1-222ENST00000590619 SRGAP1Q7Z6B7 1085 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 CCDC82Q8N4S0 544 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 PNPLA1Q8N8W4 532 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 CRYGNQ8WXF5 182 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 ADAMTS14Q8WXS8 1223 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 PIGKQ92643 395 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 ZFYVE19Q96K21 471 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 HHIPQ96QV1 700 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 TMEM209Q96SK2 561 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 ANO3Q9BYT9 981 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 RIC8AQ9NPQ8 531 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 DISC1Q9NRI5 854 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 TMEM74BQ9NUR3 256 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 EBF1Q9UH73 591 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 EVLQ9UI08 416 aaPredicted RBP7.22□□□□□ -1.25
DNMT1-222ENST00000590619 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 SHROOM3Q8TF72 1996 aa7.22□□□□□ -1.25
DNMT1-222ENST00000590619 SF3B1O75533 1304 aaKnown RBP eCLIP7.22□□□□□ -1.25
DNMT1-222ENST00000590619 USP9XQ93008 2570 aaPredicted RBP7.21□□□□□ -1.25
DNMT1-222ENST00000590619 SPTA1P02549 2419 aa7.21□□□□□ -1.25
DNMT1-222ENST00000590619 ABLIM3O94929 683 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 SEC24AO95486 1093 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 CYP3A4P08684 503 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 ENGP17813 658 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 CLK2P49760 499 aaKnown RBP7.21□□□□□ -1.26
DNMT1-222ENST00000590619 GNAQP50148 359 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 CYP4F3Q08477 520 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 TRIM61Q5EBN2 209 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 C20orf194Q5TEA3 1177 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 PMS2CLQ68D20 193 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 FSTL4Q6MZW2 842 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 PDZD4Q76G19 769 aaPredicted RBP7.21□□□□□ -1.26
DNMT1-222ENST00000590619 HEATR3Q7Z4Q2 680 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 PLEKHM2Q8IWE5 1019 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 YAF2Q8IY57 180 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 LSM14AQ8ND56 463 aaKnown RBP7.21□□□□□ -1.26
DNMT1-222ENST00000590619 CTCFLQ8NI51 663 aaPredicted RBP7.21□□□□□ -1.26
DNMT1-222ENST00000590619 ZNF461Q8TAF7 563 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 FAM200AQ8TCP9 573 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 PRPF31Q8WWY3 499 aaKnown RBP7.21□□□□□ -1.26
DNMT1-222ENST00000590619 RILPL2Q969X0 211 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 E2F7Q96AV8 911 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 CAMK1GQ96NX5 476 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 CLMPQ9H6B4 373 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 FBRSL1Q9HCM7 1045 aaKnown RBP7.21□□□□□ -1.26
DNMT1-222ENST00000590619 KLK14Q9P0G3 267 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 MTRRQ9UBK8 725 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 DKK4Q9UBT3 224 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 CDY1Q9Y6F8 540 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 GON4LQ3T8J9 2241 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 PLXNB3Q9ULL4 1909 aa7.21□□□□□ -1.26
DNMT1-222ENST00000590619 SMCO2A6NFE2 343 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 CASTOR2A6NHX0 329 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 DDX11L8A8MPP1 907 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 WDR64B1ANS9 1081 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 KIF4AO95239 1232 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 LRG1P02750 347 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 CD59P13987 128 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 BCKDHBP21953 392 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 FGFR3P22607 806 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 KCNC4Q03721 635 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 TNK2Q07912 1038 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 TRDNQ13061 729 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 KARSQ15046 597 aaKnown RBP7.2□□□□□ -1.26
DNMT1-222ENST00000590619 TEAD2Q15562 447 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 TRIP6Q15654 476 aaKnown RBP7.2□□□□□ -1.26
DNMT1-222ENST00000590619 XKR3Q5GH77 459 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 TMEM196Q5HYL7 178 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 WWC2Q6AWC2 1192 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 CD300LGQ6UXG3 332 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 CYP2U1Q7Z449 544 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 SCUBE3Q8IX30 993 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 ZNF654Q8IZM8 581 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 CPB2Q96IY4 423 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 CSRNP2Q9H175 543 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 CXCL16Q9H2A7 254 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 PRORYQ9H606 182 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 FSCN3Q9NQT6 498 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 CEP72Q9P209 647 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 BACE2Q9Y5Z0 518 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 COL4A2P08572 1712 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 KALRNO60229 2985 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 ATG2BQ96BY7 2078 aa7.2□□□□□ -1.26
DNMT1-222ENST00000590619 TRABD2BA6NFA1 517 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 PYCARD-AS1I3L0S3 204 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 TRDMT1O14717 391 aaKnown RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 ADAMTS3O15072 1205 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 EDIL3O43854 480 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms