RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 ZMAT2Q96NC0 199 aaKnown RBP23.16■■□□□ 1.3
ATG4D-212ENST00000590096 TSPAN18Q96SJ8 248 aa23.16■■□□□ 1.3
ATG4D-212ENST00000590096 GTPBP4Q9BZE4 634 aaKnown RBP23.16■■□□□ 1.3
ATG4D-212ENST00000590096 ENTPD7Q9NQZ7 604 aa23.16■■□□□ 1.3
ATG4D-212ENST00000590096 LMBRD1Q9NUN5 540 aa23.16■■□□□ 1.3
ATG4D-212ENST00000590096 MARCH5Q9NX47 278 aa23.16■■□□□ 1.3
ATG4D-212ENST00000590096 HSPBP1Q9NZL4 362 aa23.16■■□□□ 1.3
ATG4D-212ENST00000590096 PRUNE2Q8WUY3 3088 aa23.15■■□□□ 1.3
ATG4D-212ENST00000590096 GOLGA8IPA6NC78 632 aa23.15■■□□□ 1.3
ATG4D-212ENST00000590096 GOLGA8JA6NMD2 632 aa23.15■■□□□ 1.3
ATG4D-212ENST00000590096 CLIC2O15247 247 aa23.15■■□□□ 1.3
ATG4D-212ENST00000590096 ADRB2P07550 413 aa23.15■■□□□ 1.3
ATG4D-212ENST00000590096 CRELD2Q6UXH1 353 aaPredicted RBP23.15■■□□□ 1.3
ATG4D-212ENST00000590096 BCL7CQ8WUZ0 217 aaPredicted RBP23.15■■□□□ 1.3
ATG4D-212ENST00000590096 PPM1EQ8WY54 764 aa23.15■■□□□ 1.3
ATG4D-212ENST00000590096 NSUN3Q9H649 340 aaKnown RBP23.15■■□□□ 1.3
ATG4D-212ENST00000590096 ASB7Q9H672 318 aa23.15■■□□□ 1.3
ATG4D-212ENST00000590096 KIAA1586Q9HCI6 787 aa23.15■■□□□ 1.3
ATG4D-212ENST00000590096 EYSQ5T1H1 3165 aa23.15■■□□□ 1.3
ATG4D-212ENST00000590096 TULP1O00294 542 aaPredicted RBP23.14■■□□□ 1.29
ATG4D-212ENST00000590096 TADA2AO75478 443 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 IL18RAPO95256 599 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 CYP2J2P51589 502 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 SPAG1Q07617 926 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 CAMK1Q14012 370 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 CCDC85BQ15834 202 aaPredicted RBP23.14■■□□□ 1.29
ATG4D-212ENST00000590096 ZNF658Q5TYW1 1059 aaPredicted RBP23.14■■□□□ 1.29
ATG4D-212ENST00000590096 PDE12Q6L8Q7 609 aaKnown RBP23.14■■□□□ 1.29
ATG4D-212ENST00000590096 TMC7Q7Z402 723 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 VPS52Q8N1B4 723 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 GUF1Q8N442 669 aaKnown RBP23.14■■□□□ 1.29
ATG4D-212ENST00000590096 ZSWIM2Q8NEG5 633 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 RABGGTAQ92696 567 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 PPP2R3CQ969Q6 453 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 DDX27Q96GQ7 796 aaKnown RBP23.14■■□□□ 1.29
ATG4D-212ENST00000590096 TCF25Q9BQ70 676 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 PAAF1Q9BRP4 392 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 GOLGA2P5Q9HBQ8 144 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 RBAKQ9NYW8 714 aaPredicted RBP23.14■■□□□ 1.29
ATG4D-212ENST00000590096 CACNG4Q9UBN1 327 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 ADAM28Q9UKQ2 775 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 UBQLN1Q9UMX0 589 aaKnown RBP23.14■■□□□ 1.29
ATG4D-212ENST00000590096 MAPK8IP1Q9UQF2 711 aa23.14■■□□□ 1.29
ATG4D-212ENST00000590096 PDXKO00764 312 aa23.13■■□□□ 1.29
ATG4D-212ENST00000590096 CALUO43852 315 aaPredicted RBP23.13■■□□□ 1.29
ATG4D-212ENST00000590096 ERVFC1P60507 584 aa23.13■■□□□ 1.29
ATG4D-212ENST00000590096 SOX4Q06945 474 aaPredicted RBP23.13■■□□□ 1.29
ATG4D-212ENST00000590096 PLPP4Q5VZY2 271 aa23.13■■□□□ 1.29
ATG4D-212ENST00000590096 JADE1Q6IE81 842 aa23.13■■□□□ 1.29
ATG4D-212ENST00000590096 BRSK2Q8IWQ3 736 aa23.13■■□□□ 1.29
ATG4D-212ENST00000590096 C12orf56Q8IXR9 622 aa23.13■■□□□ 1.29
ATG4D-212ENST00000590096 XXYLT1Q8NBI6 393 aa23.13■■□□□ 1.29
ATG4D-212ENST00000590096 C18orf25Q96B23 403 aaPredicted RBP23.13■■□□□ 1.29
ATG4D-212ENST00000590096 KCTD10Q9H3F6 313 aa23.13■■□□□ 1.29
ATG4D-212ENST00000590096 NGRNQ9NPE2 291 aaKnown RBP23.13■■□□□ 1.29
ATG4D-212ENST00000590096 DERAQ9Y315 318 aa23.13■■□□□ 1.29
ATG4D-212ENST00000590096 ATG2AQ2TAZ0 1938 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 ZNF233A6NK53 670 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 F8W810 466 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 ANK1P16157 1881 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 CYP3A5P20815 502 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 RPL9P32969 192 aaKnown RBP23.12■■□□□ 1.29
ATG4D-212ENST00000590096 CA8P35219 290 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 IRS1P35568 1242 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 CLCNKBP51801 687 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 TMEM132DQ14C87 1099 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 CAMK4Q16566 473 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 UPP1Q16831 310 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 DCLRE1AQ6PJP8 1040 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 SMYD4Q8IYR2 804 aaPredicted RBP23.12■■□□□ 1.29
ATG4D-212ENST00000590096 TUBGCP4Q9UGJ1 667 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 VCANP13611 3396 aa23.12■■□□□ 1.29
ATG4D-212ENST00000590096 SF3B1O75533 1304 aaKnown RBP eCLIP23.11■■□□□ 1.294e-6■■■■■ 119.4
ATG4D-212ENST00000590096 MYO7AQ13402 2215 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 PODXLO00592 558 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 FSCN2O14926 492 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 EXOC3O60645 756 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 B3GAT3O94766 335 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 KIF4AO95239 1232 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 SOD2P04179 222 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 SMC1AQ14683 1233 aaKnown RBP23.11■■□□□ 1.29
ATG4D-212ENST00000590096 FUT10Q6P4F1 479 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 BEST2Q8NFU1 509 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 HASPINQ8TF76 798 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 ZBP1Q9H171 429 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 MAN1B1Q9UKM7 699 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 C2CD2Q9Y426 696 aa23.11■■□□□ 1.29
ATG4D-212ENST00000590096 TMEM189-UBE2V1I3L0A0 370 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 NFICP08651 508 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 CTSAP10619 480 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 ELAVL2Q12926 359 aaKnown RBP23.1■■□□□ 1.29
ATG4D-212ENST00000590096 STIM1Q13586 685 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 SKIV2LQ15477 1246 aaKnown RBP23.1■■□□□ 1.29
ATG4D-212ENST00000590096 ZBTB6Q15916 424 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 SNRNP35Q16560 246 aaKnown RBP23.1■■□□□ 1.29
ATG4D-212ENST00000590096 TCEAL5Q5H9L2 206 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 NT5DC4Q86YG4 428 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 CBWD2Q8IUF1 395 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 RDH13Q8NBN7 331 aa23.1■■□□□ 1.29
ATG4D-212ENST00000590096 FBXL18Q96ME1 805 aa23.1■■□□□ 1.29
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