RNA–Protein interactions for RNA: ENST00000589994.5

PRKACA-208, Transcript of protein kinase cAMP-activated catalytic subunit alpha, human

TSL 2 BASIC

Gene PRKACA, Length 1,127 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKACA-208	ENST00000589994	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	NPAS3	Q8IXF0	933 aa		13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	DEPTOR	Q8TB45	409 aa		13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	DDX27	Q96GQ7	796 aa	Known RBP	13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	PPP1R10	Q96QC0	940 aa	Known RBP	13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	NACC1	Q96RE7	527 aa		13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	C2orf40	Q9H1Z8	148 aa		13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	DNMT3B	Q9UBC3	853 aa	Known RBP	13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	MTRR	Q9UBK8	725 aa		13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	DENND4C	Q5VZ89	1909 aa		13.97	□□□□□ -0.17
PRKACA-208	ENST00000589994	ATG2B	Q96BY7	2078 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	NRG2	O14511	850 aa	Predicted RBP	13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	XYLB	O75191	536 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	CYP11B2	P19099	503 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	HOXA9	P31269	272 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	NAMPT	P43490	491 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	NEK4	P51957	841 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	OSTN	P61366	133 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	RAB33A	Q14088	237 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	PABPC1L	Q4VXU2	614 aa	Known RBP	13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	ATF7IP2	Q5U623	682 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	MTSS1L	Q765P7	747 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	ERMP1	Q7Z2K6	904 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	TMEM130	Q8N3G9	435 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	PLA2G2F	Q9BZM2	168 aa		13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.96	□□□□□ -0.17
PRKACA-208	ENST00000589994	OBSL1	O75147	1896 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	KANSL1L	A0AUZ9	987 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	MED19	A0JLT2	244 aa	Predicted RBP	13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	B3GAT3	O94766	335 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	OR52Z1	P0C646	297 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	CEBPB	P17676	345 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	FGFR3	P22607	806 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	RPA1	P27694	616 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	ELAVL2	Q12926	359 aa	Known RBP	13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	UPP1	Q16831	310 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	DCAF4L1	Q3SXM0	396 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	SLC44A4	Q53GD3	710 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	ZC3H14	Q6PJT7	736 aa	Known RBP	13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	MCRS1	Q96EZ8	462 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	DDX23	Q9BUQ8	820 aa	Known RBP	13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	BHMT2	Q9H2M3	363 aa		13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.95	□□□□□ -0.18
PRKACA-208	ENST00000589994	WDR27	A2RRH5	827 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	TMEM189-UBE2V1	I3L0A0	370 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	SCN1A	P35498	2009 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	CCT6A	P40227	531 aa	Known RBP	13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	ROR1	Q01973	937 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	TPRG1	Q6ZUI0	275 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	CCDC83	Q8IWF9	413 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	SUMF1	Q8NBK3	374 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	ERMN	Q8TAM6	284 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	TCEAL4	Q96EI5	215 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	ZMAT2	Q96NC0	199 aa	Known RBP	13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	CDT1	Q9H211	546 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	SEMA4A	Q9H3S1	761 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	LTB4R2	Q9NPC1	389 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	HEBP1	Q9NRV9	189 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	MRPS23	Q9Y3D9	190 aa	Known RBP	13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	EPG5	Q9HCE0	2579 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	SPAG17	Q6Q759	2223 aa		13.94	□□□□□ -0.18
PRKACA-208	ENST00000589994	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	SMIM28	A0A1B0GU29	152 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	FAM170B	A6NMN3	283 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	RHO	P08100	348 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	TARS	P26639	723 aa	Known RBP	13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	RBM25	P49756	843 aa	Known RBP	13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	ARPP19	P56211	112 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	PPP2R5A	Q15172	486 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	TTC38	Q5R3I4	469 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	TANGO2	Q6ICL3	276 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	PDXDC1	Q6P996	788 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	TSSK4	Q6SA08	328 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	TAS1R3	Q7RTX0	852 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	SHD	Q96IW2	340 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	IFT74	Q96LB3	600 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	BCO2	Q9BYV7	579 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	DDX19A	Q9NUU7	478 aa	Known RBP	13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	KIAA1024	Q9UPX6	916 aa		13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	TPR	P12270	2363 aa	Known RBP	13.93	□□□□□ -0.18
PRKACA-208	ENST00000589994	EML5	Q05BV3	1969 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	CACNA1B	Q00975	2339 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	CHD8	Q9HCK8	2581 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	CFAP47	Q6ZTR5	3102 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	SHISA7	A6NL88	538 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	CCDC169	A6NNP5	214 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	PP2D1	A8MPX8	630 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	MEFV	O15553	781 aa	Predicted RBP	13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	LAMTOR5	O43504	91 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	SEC24B	O95487	1268 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	HARS	P12081	509 aa	Known RBP	13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	CCR2	P41597	374 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	PEX3	P56589	373 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	PRKCQ	Q04759	706 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	CSTF1	Q05048	431 aa	Known RBP	13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	GRM2	Q14416	872 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	SAFB	Q15424	915 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	UVSSA	Q2YD98	709 aa		13.92	□□□□□ -0.18
PRKACA-208	ENST00000589994	ZNF568	Q3ZCX4	644 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms