RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 EMSYQ7Z589 1322 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 SPDYE16A6NNV3 312 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 A8MXQ7 604 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 POLD1P28340 1107 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 BCAR1P56945 870 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 DDR1Q08345 913 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 PTPAQ15257 358 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 TRMT5Q32P41 509 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 ARL13BQ3SXY8 428 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 TTC33Q6PID6 262 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 IZUMO2Q6UXV1 221 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 JADE3Q92613 823 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 GIMAP4Q9NUV9 329 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 XDHP47989 1333 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 PNPLA7Q6ZV29 1317 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 ADGRA3Q8IWK6 1321 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 NPEPPSP55786 919 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 ABCE1P61221 599 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 TTC39BQ5VTQ0 682 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 PRUNE1Q86TP1 453 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 ASPSCR1Q9BZE9 553 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 SEC31BQ9NQW1 1179 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 FAM8A1Q9UBU6 413 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 MARCOQ9UEW3 520 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 PXDNLA1KZ92 1463 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 HEG1Q9ULI3 1381 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 IQCA1LA6NCM1 817 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 ERVV-1B6SEH8 477 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 TRAPPC3O43617 180 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 TBC1D4O60343 1298 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 TBX2Q13207 712 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 DLGAP5Q15398 846 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 EZH2Q15910 746 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 PADI6Q6TGC4 694 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 CYGBQ8WWM9 190 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 BTBD7Q9P203 1132 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 ATP4AP20648 1035 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 CA8P35219 290 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 CDKAL1Q5VV42 579 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 STK32AQ8WU08 396 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 AS3MTQ9HBK9 375 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 CDY2AQ9Y6F7 541 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 CDY1Q9Y6F8 540 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 TRIM49P0CI25 452 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 TRIM49CP0CI26 452 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 COMTP21964 271 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 PMLP29590 882 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 CPA2P48052 419 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 ROR2Q01974 943 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 KRR1Q13601 381 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 TMA16Q96EY4 203 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 UTP6Q9NYH9 597 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 AIM2O14862 343 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 GLI1P08151 1106 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 ZNF18P17022 549 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 EIF3EP60228 445 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 RPS6KC1Q96S38 1066 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 IL25Q9H293 177 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 WHRNQ9P202 907 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 TEKT2Q9UIF3 430 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 F8VZ95 297 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 ANGPT2O15123 496 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 ZNF667Q5HYK9 610 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 SNX30Q5VWJ9 437 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 HORMAD1Q86X24 394 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 LRRC4Q9HBW1 653 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 USP21Q9UK80 565 aa15.38■□□□□ 0.05
SMARCA4-214ENST00000589677 ABCA9Q8IUA7 1624 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 K7ERI5 159 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 M0QZ92 97 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 PSAPP07602 524 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 PSMC3P17980 439 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 TRIM60Q495X7 471 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 SCARA5Q6ZMJ2 495 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 EXT2Q93063 718 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 HERC5Q9UII4 1024 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 GRID1Q9ULK0 1009 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 POTEFA5A3E0 1075 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 HNRNPRO43390 633 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 AP1G2O75843 785 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 POTEGQ6S5H5 508 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 POTEEQ6S8J3 1075 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 C3orf62Q6ZUJ4 267 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 PCYOX1LQ8NBM8 494 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 ZC3H7BQ9UGR2 993 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 CYP26A1O43174 497 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 SRP72O76094 671 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 CDH2P19022 906 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 JAK3P52333 1124 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 SLC13A5Q86YT5 568 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 DCAF4Q8WV16 495 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 SKA2Q8WVK7 121 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 C20orf96Q9NUD7 363 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 DUSP10Q9Y6W6 482 aa15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 ATXN2Q99700 1313 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-214ENST00000589677 WEE2P0C1S8 567 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms