RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 AOPEPQ8N6M6 819 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 CCDC127Q96BQ5 260 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 ZMAT2Q96NC0 199 aaKnown RBP13.19□□□□□ -0.3
DNMT1-218ENST00000589294 PPP1R10Q96QC0 940 aaKnown RBP13.19□□□□□ -0.3
DNMT1-218ENST00000589294 CBX8Q9HC52 389 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
DNMT1-218ENST00000589294 FANCLQ9NW38 375 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 MAGEC2Q9UBF1 373 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-218ENST00000589294 INPP5FQ9Y2H2 1132 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 POMCP01189 267 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 TNNI1P19237 187 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 SCNN1GP51170 649 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 RNASELQ05823 741 aaKnown RBP13.18□□□□□ -0.3
DNMT1-218ENST00000589294 BTG3Q14201 252 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-218ENST00000589294 TMEM132DQ14C87 1099 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
DNMT1-218ENST00000589294 CDKAL1Q5VV42 579 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 JADE1Q6IE81 842 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 WDR49Q8IV35 697 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 SP7Q8TDD2 431 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-218ENST00000589294 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
DNMT1-218ENST00000589294 FAM193BQ96PV7 902 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-218ENST00000589294 CGRRF1Q99675 332 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 CXCL16Q9H2A7 254 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 TBC1D13Q9NVG8 400 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 INTS13Q9NVM9 706 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 UBQLN1Q9UMX0 589 aaKnown RBP13.18□□□□□ -0.3
DNMT1-218ENST00000589294 PCDHA11Q9Y5I1 949 aa13.18□□□□□ -0.3
DNMT1-218ENST00000589294 LRRC10BA6NIK2 292 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 TNNC2P02585 160 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 ALDH2P05091 517 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 DLATP10515 647 aaKnown RBP13.17□□□□□ -0.3
DNMT1-218ENST00000589294 ZNF18P17022 549 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 CDK11BP21127 795 aaKnown RBP13.17□□□□□ -0.3
DNMT1-218ENST00000589294 RPL9P32969 192 aaKnown RBP13.17□□□□□ -0.3
DNMT1-218ENST00000589294 GATMP50440 423 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 TPM4P67936 248 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 TFAMQ00059 246 aaKnown RBP13.17□□□□□ -0.3
DNMT1-218ENST00000589294 SPAG1Q07617 926 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 DSC1Q08554 894 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 TUSC3Q13454 348 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 NAB2Q15742 525 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 TCP11X2Q5H9J9 407 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 TRIM59Q8IWR1 403 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 LRRC43Q8N309 656 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 FIBCD1Q8N539 461 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 BEST2Q8NFU1 509 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 PLEKHO2Q8TD55 490 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 ANKRD36BP1Q96IX9 119 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 CNOT6LQ96LI5 555 aaKnown RBP13.17□□□□□ -0.3
DNMT1-218ENST00000589294 UROC1Q96N76 676 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 POP1Q99575 1024 aaKnown RBP13.17□□□□□ -0.3
DNMT1-218ENST00000589294 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
DNMT1-218ENST00000589294 LRRIQ3A6PVS8 624 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-218ENST00000589294 KCNJ18B7U540 433 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 GOLGA6L19H0YKK7 550 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 TULP1O00294 542 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-218ENST00000589294 PMM2O15305 246 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 DDHD2O94830 711 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 NFICP08651 508 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 PAX3P23760 479 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 LRPAP1P30533 357 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 MTIF2P46199 727 aaKnown RBP13.16□□□□□ -0.3
DNMT1-218ENST00000589294 WNT7BP56706 349 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 DLG4P78352 724 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 KCNJ12Q14500 433 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 RAB30Q15771 203 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 PAN2Q504Q3 1202 aaKnown RBP13.16□□□□□ -0.3
DNMT1-218ENST00000589294 GLRA4Q5JXX5 417 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 C1orf220Q5T0J3 134 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 CREBRFQ8IUR6 639 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 EFCAB13Q8IY85 973 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 ANKRD20A12PQ8NF67 263 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 ZNF516Q92618 1163 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 CLP1Q92989 425 aaKnown RBP13.16□□□□□ -0.3
DNMT1-218ENST00000589294 SLC35C1Q96A29 364 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 TMEM175Q9BSA9 504 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 HSD3B7Q9H2F3 369 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 CWH43Q9H720 699 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 NRDE2Q9H7Z3 1164 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 DPP3Q9NY33 737 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 ITGA11Q9UKX5 1188 aa13.16□□□□□ -0.3
DNMT1-218ENST00000589294 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
DNMT1-218ENST00000589294 GRXCR1A8MXD5 290 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 P4HA2O15460 535 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 C4BPAP04003 597 aaKnown RBP13.15□□□□□ -0.3
DNMT1-218ENST00000589294 TMEM191BP0C7N4 346 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 ALDH7A1P49419 539 aaKnown RBP13.15□□□□□ -0.3
DNMT1-218ENST00000589294 RABGGTBP53611 331 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 RBP5P82980 135 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
DNMT1-218ENST00000589294 LRIT3Q3SXY7 679 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 ZACNQ401N2 412 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms