RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PAF1Q8N7H5 531 aa6.6□□□□□ -1.35
TUBD1-208ENST00000588009 REPS2Q8NFH8 660 aa6.6□□□□□ -1.35
TUBD1-208ENST00000588009 KBTBD7Q8WVZ9 684 aa6.6□□□□□ -1.35
TUBD1-208ENST00000588009 CASKIN2Q8WXE0 1202 aa6.6□□□□□ -1.35
TUBD1-208ENST00000588009 C1orf43Q9BWL3 253 aa6.6□□□□□ -1.35
TUBD1-208ENST00000588009 AGO4Q9HCK5 861 aaKnown RBP6.6□□□□□ -1.35
TUBD1-208ENST00000588009 SPATA6Q9NWH7 488 aaPredicted RBP6.6□□□□□ -1.35
TUBD1-208ENST00000588009 STK32BQ9NY57 414 aa6.6□□□□□ -1.35
TUBD1-208ENST00000588009 ANAPC4Q9UJX5 808 aa6.6□□□□□ -1.35
TUBD1-208ENST00000588009 GTF2A1LQ9UNN4 478 aa6.6□□□□□ -1.35
TUBD1-208ENST00000588009 TEX51A0A1B0GUA7 166 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 BIN1O00499 593 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 HARSP12081 509 aaKnown RBP6.59□□□□□ -1.35
TUBD1-208ENST00000588009 CD53P19397 219 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 FPR1P21462 350 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 PTPN7P35236 360 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 MEOX1P50221 254 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 ARFIP2P53365 341 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 PCOLCEQ15113 449 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 PUM3Q15397 648 aaKnown RBP6.59□□□□□ -1.35
TUBD1-208ENST00000588009 ELF2Q15723 593 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 PRR31Q5SQ13 230 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 KLHDC7AQ5VTJ3 777 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 TMEM132EQ6IEE7 984 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 PGBD2Q6P3X8 592 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 MPZL3Q6UWV2 235 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 DCBLD1Q8N8Z6 715 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 ATP11CQ8NB49 1132 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 NUDT10Q8NFP7 164 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 FBXO18Q8NFZ0 1043 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 OR10H5Q8NGA6 315 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 NUDT11Q96G61 164 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 LIN37Q96GY3 246 aaPredicted RBP6.59□□□□□ -1.35
TUBD1-208ENST00000588009 P2RX7Q99572 595 aaKnown RBP6.59□□□□□ -1.35
TUBD1-208ENST00000588009 TTLL2Q9BWV7 592 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 TRIM54Q9BYV2 358 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 MCOLN1Q9GZU1 580 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 SACM1LQ9NTJ5 587 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 SIDT1Q9NXL6 827 aaKnown RBP6.59□□□□□ -1.35
TUBD1-208ENST00000588009 COL20A1Q9P218 1284 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 AFF4Q9UHB7 1163 aaKnown RBP6.59□□□□□ -1.35
TUBD1-208ENST00000588009 CTDP1Q9Y5B0 961 aaPredicted RBP6.59□□□□□ -1.35
TUBD1-208ENST00000588009 ACTL7AQ9Y615 435 aa6.59□□□□□ -1.35
TUBD1-208ENST00000588009 A0A1W2PPC4 97 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 ZNF503-AS2A6NEH8 195 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 HMGB1P1B2RPK0 211 aaPredicted RBP6.58□□□□□ -1.36
TUBD1-208ENST00000588009 WNT10BO00744 389 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 AHSGP02765 367 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 THP07101 528 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 IL2RBP14784 551 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 GYPEP15421 78 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 HDCP19113 662 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 LIMS1P48059 325 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 CCT5P48643 541 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 HSPA7P48741 367 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 FLT3LGP49771 235 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 MRE11P49959 708 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 EPHB3P54753 998 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 ICA1Q05084 483 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 ARL13BQ3SXY8 428 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 CCDC38Q502W7 563 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 ALFQ53S48 1182 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 C3orf38Q5JPI3 329 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 EMC10Q5UCC4 262 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 MYCT1Q8N699 235 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 ZNF527Q8NB42 609 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 GCDHQ92947 438 aaPredicted RBP6.58□□□□□ -1.36
TUBD1-208ENST00000588009 NMD3Q96D46 503 aaKnown RBP6.58□□□□□ -1.36
TUBD1-208ENST00000588009 BRIP1Q9BX63 1249 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 KRTAP9-9Q9BYP9 154 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 KRTAP9-4Q9BYQ2 154 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 KATNBL1Q9H079 304 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 LZTS1Q9Y250 596 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 CEP83Q9Y592 693 aa6.58□□□□□ -1.36
TUBD1-208ENST00000588009 RBM8AQ9Y5S9 174 aaKnown RBP6.58□□□□□ -1.36
TUBD1-208ENST00000588009 MTSS1O43312 755 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 CD1AP06126 327 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 ZNF28P17035 718 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 ITGB5P18084 799 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 SOX8P57073 446 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 HTRA4P83105 476 aaPredicted RBP6.57□□□□□ -1.36
TUBD1-208ENST00000588009 DUSP2Q05923 314 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 SP140Q13342 867 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 BLMHQ13867 455 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 STARD3Q14849 445 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 MPEG1Q2M385 716 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 PRAMEF14Q5SWL7 426 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 ZNF572Q7Z3I7 529 aaPredicted RBP6.57□□□□□ -1.36
TUBD1-208ENST00000588009 ZDHHC14Q8IZN3 488 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 OR6B3Q8NGW1 331 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 MDM1Q8TC05 714 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 TNPO1Q92973 898 aaKnown RBP6.57□□□□□ -1.36
TUBD1-208ENST00000588009 LPPQ93052 612 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 ISCA1Q9BUE6 129 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 SGPP1Q9BX95 441 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 DPH1Q9BZG8 443 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 MYLK2Q9H1R3 596 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 ADAM7Q9H2U9 754 aa6.57□□□□□ -1.36
TUBD1-208ENST00000588009 NSUN3Q9H649 340 aaKnown RBP6.57□□□□□ -1.36
TUBD1-208ENST00000588009 FAM184BQ9ULE4 1060 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms