RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CXCL17Q6UXB2 119 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 TMEM192Q8IY95 271 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 TRIM58Q8NG06 486 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 SLC30A5Q8TAD4 765 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 OSMRQ99650 979 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 ADPGKQ9BRR6 497 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 PACSIN1Q9BY11 444 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 IMPG2Q9BZV3 1241 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 SRRDQ9UH36 339 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 CYP26A1O43174 497 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 B4GALT4O60513 344 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 TNFAIP3P21580 790 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 FGFR4P22455 802 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 HOXC8P31273 242 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 TFAMQ00059 246 aaKnown RBP21.37■■□□□ 1.01
TRIM47-204ENST00000587339 KYAT1Q16773 422 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 TRAPPC11Q7Z392 1133 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 RNF10Q8N5U6 811 aaKnown RBP21.37■■□□□ 1.01
TRIM47-204ENST00000587339 LNX1Q8TBB1 728 aaPredicted RBP21.37■■□□□ 1.01
TRIM47-204ENST00000587339 CD99L2Q8TCZ2 262 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 U2AF1L4Q8WU68 220 aaKnown RBP21.37■■□□□ 1.01
TRIM47-204ENST00000587339 AGPAT1Q99943 283 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 CDHR5Q9HBB8 845 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 XPNPEP3Q9NQH7 507 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 NENFQ9UMX5 172 aa21.37■■□□□ 1.01
TRIM47-204ENST00000587339 TACC1O75410 805 aa21.36■■□□□ 1.01
TRIM47-204ENST00000587339 CLSTN1O94985 981 aa21.36■■□□□ 1.01
TRIM47-204ENST00000587339 SLU7O95391 586 aaKnown RBP21.36■■□□□ 1.01
TRIM47-204ENST00000587339 TMEM191BP0C7N4 346 aa21.36■■□□□ 1.01
TRIM47-204ENST00000587339 CCND3P30281 292 aaPredicted RBP21.36■■□□□ 1.01
TRIM47-204ENST00000587339 PCBP1Q15365 356 aaKnown RBP eCLIP21.36■■□□□ 1.01
TRIM47-204ENST00000587339 SPOPLQ6IQ16 392 aa21.36■■□□□ 1.01
TRIM47-204ENST00000587339 CATSPER4Q7RTX7 472 aa21.36■■□□□ 1.01
TRIM47-204ENST00000587339 ZNF784Q8NCA9 323 aaPredicted RBP21.36■■□□□ 1.01
TRIM47-204ENST00000587339 SEPT11Q9NVA2 429 aaKnown RBP21.36■■□□□ 1.01
TRIM47-204ENST00000587339 SALL4Q9UJQ4 1053 aa21.36■■□□□ 1.01
TRIM47-204ENST00000587339 MRFAP1Q9Y605 127 aa21.36■■□□□ 1.01
TRIM47-204ENST00000587339 CAPN6Q9Y6Q1 641 aa21.36■■□□□ 1.01
TRIM47-204ENST00000587339 MOCS3O95396 460 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 DARSP14868 501 aaKnown RBP21.35■■□□□ 1.01
TRIM47-204ENST00000587339 EIF4BP23588 611 aaKnown RBP21.35■■□□□ 1.01
TRIM47-204ENST00000587339 NKX3-2P78367 333 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 POU5F1Q01860 360 aaKnown RBP21.35■■□□□ 1.01
TRIM47-204ENST00000587339 OLIG1Q8TAK6 271 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 EPS8L1Q8TE68 723 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 DHX38Q92620 1227 aaKnown RBP21.35■■□□□ 1.01
TRIM47-204ENST00000587339 NOX5Q96PH1 765 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 ALS2CR12Q96Q35 445 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 ARID3AQ99856 593 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 ADAMTS4O75173 837 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 SGPL1O95470 568 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 CST3P01034 146 aaPredicted RBP21.35■■□□□ 1.01
TRIM47-204ENST00000587339 TNNC2P02585 160 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 KRT5P13647 590 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 VEGFBP49765 207 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 NAP1L1P55209 391 aaKnown RBP21.35■■□□□ 1.01
TRIM47-204ENST00000587339 NOP14P78316 857 aaKnown RBP21.35■■□□□ 1.01
TRIM47-204ENST00000587339 SLC47A2Q86VL8 602 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 EFCAB13Q8IY85 973 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 SLC20A1Q8WUM9 679 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 ANKRD36BP1Q96IX9 119 aa21.35■■□□□ 1.01
TRIM47-204ENST00000587339 APOBEC3GQ9HC16 384 aaKnown RBP21.35■■□□□ 1.01
TRIM47-204ENST00000587339 ENC1O14682 589 aa21.34■■□□□ 1.01
TRIM47-204ENST00000587339 BUB1O43683 1085 aa21.34■■□□□ 1.01
TRIM47-204ENST00000587339 H2AFZP0C0S5 128 aa21.34■■□□□ 1.01
TRIM47-204ENST00000587339 H2AFVQ71UI9 128 aa21.34■■□□□ 1.01
TRIM47-204ENST00000587339 ZNF710Q8N1W2 664 aa21.34■■□□□ 1.01
TRIM47-204ENST00000587339 NME8Q8N427 588 aa21.34■■□□□ 1.01
TRIM47-204ENST00000587339 ATP8B3O60423 1300 aa21.34■■□□□ 1.01
TRIM47-204ENST00000587339 CTIFO43310 598 aaKnown RBP21.33■■□□□ 1.01
TRIM47-204ENST00000587339 HMGCRP04035 888 aa21.33■■□□□ 1.01
TRIM47-204ENST00000587339 MYCNP04198 464 aaPredicted RBP21.33■■□□□ 1.01
TRIM47-204ENST00000587339 TBXAS1P24557 533 aaPredicted RBP21.33■■□□□ 1.01
TRIM47-204ENST00000587339 HOXA11P31270 313 aaPredicted RBP21.33■■□□□ 1.01
TRIM47-204ENST00000587339 PDE6CP51160 858 aa21.33■■□□□ 1.01
TRIM47-204ENST00000587339 TRPC3Q13507 836 aa21.33■■□□□ 1.01
TRIM47-204ENST00000587339 CUL2Q13617 745 aa21.33■■□□□ 1.01
TRIM47-204ENST00000587339 NBPF20Q3BBV1 942 aa21.33■■□□□ 1.01
TRIM47-204ENST00000587339 TAF2Q6P1X5 1199 aa21.33■■□□□ 1.01
TRIM47-204ENST00000587339 APBB1IPQ7Z5R6 666 aaPredicted RBP21.33■■□□□ 1.01
TRIM47-204ENST00000587339 ASB7Q9H672 318 aa21.33■■□□□ 1.01
TRIM47-204ENST00000587339 NOCTQ9UK39 431 aaKnown RBP21.33■■□□□ 1.01
TRIM47-204ENST00000587339 INTUQ9ULD6 942 aa21.33■■□□□ 1.01
TRIM47-204ENST00000587339 NUB1Q9Y5A7 615 aa21.33■■□□□ 1.01
TRIM47-204ENST00000587339 ANO9A1A5B4 782 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 BTNL10A8MVZ5 291 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 LACTBL1A8MY62 500 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 ASS1P00966 412 aaKnown RBP21.33■■□□□ 1
TRIM47-204ENST00000587339 CYP11B1P15538 503 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 TUBB2AQ13885 445 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 SNX17Q15036 470 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 DCAF4L1Q3SXM0 396 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 NOP9Q86U38 636 aaKnown RBP21.33■■□□□ 1
TRIM47-204ENST00000587339 DNAAF5Q86Y56 855 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 RPUSD2Q8IZ73 545 aaKnown RBP21.33■■□□□ 1
TRIM47-204ENST00000587339 RAET1EQ8TD07 263 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 ACAP3Q96P50 834 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 TUBB2BQ9BVA1 445 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 ACP6Q9NPH0 428 aa21.33■■□□□ 1
TRIM47-204ENST00000587339 GTF2IRD1Q9UHL9 959 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms