RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 NBL1P41271 181 aa16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 EFNA5P52803 228 aa16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 ANGPT1Q15389 498 aa16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 SPECC1Q5M775 1068 aa16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 AXDND1Q5T1B0 1012 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 ING5Q8WYH8 240 aa16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 DDX27Q96GQ7 796 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 ZSCAN31Q96LW9 406 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 ZMAT2Q96NC0 199 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 PLIN2Q99541 437 aa16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 ACO2Q99798 780 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 SH2B1Q9NRF2 756 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 MTRRQ9UBK8 725 aa16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 TNFSF13BQ9Y275 285 aa16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 CDY1Q9Y6F8 540 aa16.69■□□□□ 0.26
PRKCSH-204ENST00000587290 GVINP1Q7Z2Y8 2422 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 ANK1P16157 1881 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 SMIM28A0A1B0GU29 152 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 PROB1E7EW31 1015 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 RFX1P22670 979 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 UPP1Q16831 310 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 SEZ6Q53EL9 994 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 ERICH6BQ5W0A0 696 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 FGF13Q92913 245 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 ZBTB45Q96K62 511 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 FOXQ1Q9C009 403 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 ARHGEF3Q9NR81 526 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 WNT16Q9UBV4 365 aa16.68■□□□□ 0.26
PRKCSH-204ENST00000587290 DCHS1Q96JQ0 3298 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 TMEM189-UBE2V1I3L0A0 370 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 ABLIM1O14639 778 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 SLC16A4O15374 487 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 LRRN2O75325 713 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 C1RP00736 705 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 GRM5P41594 1212 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 ELAVL2Q12926 359 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 DMP1Q13316 513 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 RAB33AQ14088 237 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 KRT79Q5XKE5 535 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 MCTP1Q6DN14 999 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 RINT1Q6NUQ1 792 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 C18orf25Q96B23 403 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 SNX27Q96L92 541 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 KXD1Q9BQD3 176 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 RTP3Q9BQQ7 232 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 PTPRHQ9HD43 1115 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 KMT5AQ9NQR1 393 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 ARHGAP28Q9P2N2 729 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 CDH7Q9ULB5 785 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 DNM3Q9UQ16 869 aa16.67■□□□□ 0.26
PRKCSH-204ENST00000587290 EIF5BO60841 1220 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 CD2BP2O95400 341 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 HNRNPA1P09651 372 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 GPC5P78333 572 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 PDIA5Q14554 519 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 DCLRE1AQ6PJP8 1040 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 POTEHQ6S545 545 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 C1orf186Q6ZWK4 172 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 FANCMQ8IYD8 2048 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 PNMA5Q96PV4 448 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 CCDC94Q9BW85 323 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 MRPL4Q9BYD3 311 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 ANKFY1Q9P2R3 1169 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 DNMT3BQ9UBC3 853 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 WDR87Q6ZQQ6 2873 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 EP300Q09472 2414 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 PATJQ8NI35 1801 aa16.66■□□□□ 0.26
PRKCSH-204ENST00000587290 NPHP3-ACAD11A0A0J9YXS1 232 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 PODXLO00592 558 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 XYLBO75191 536 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 PROZP22891 400 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 YARSP54577 528 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 ARPP19P56211 112 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 ROR1Q01973 937 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 SLC5A9Q2M3M2 681 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 VARS2Q5ST30 1063 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 ALKAL1Q6UXT8 129 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 DTHD1Q6ZMT9 781 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 NPAS3Q8IXF0 933 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 NKD2Q969F2 451 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 NXPE3Q969Y0 559 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 TCHPQ9BT92 498 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 RAB34Q9BZG1 259 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 R4GN57 208 aa16.65■□□□□ 0.26
PRKCSH-204ENST00000587290 WDR27A2RRH5 827 aa16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 NRG2O14511 850 aaPredicted RBP16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 GLULP15104 373 aa16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 HOXA9P31269 272 aa16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 SPAG1Q07617 926 aa16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 SNW1Q13573 536 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 PABPC1LQ4VXU2 614 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 XKR4Q5GH76 650 aa16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 PDXDC1Q6P996 788 aa16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 DRC1Q96MC2 740 aa16.64■□□□□ 0.25
PRKCSH-204ENST00000587290 UROC1Q96N76 676 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms