RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 GDAQ9Y2T3 454 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 MEFVO15553 781 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-225ENST00000586385 KINO60870 393 aaKnown RBP13.11□□□□□ -0.31
BRCA1-225ENST00000586385 LILRB5O75023 590 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 CEBPBP17676 345 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 CYP11B2P19099 503 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 ATP2B1P20020 1258 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 TGM1P22735 817 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 FCARP24071 287 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 BRCC3P46736 316 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 CLCNKBP51801 687 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 CSTF1Q05048 431 aaKnown RBP13.11□□□□□ -0.31
BRCA1-225ENST00000586385 ELAVL2Q12926 359 aaKnown RBP13.11□□□□□ -0.31
BRCA1-225ENST00000586385 ECM1Q16610 540 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 RSPO4Q2I0M5 234 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-225ENST00000586385 UVSSAQ2YD98 709 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 PADI6Q6TGC4 694 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 ZBTB8OSQ8IWT0 167 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 WASF1Q92558 559 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 GTF3C6Q969F1 213 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 MCRS1Q96EZ8 462 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
BRCA1-225ENST00000586385 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-225ENST00000586385 BCO2Q9BYV7 579 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 BACE2Q9Y5Z0 518 aa13.11□□□□□ -0.31
BRCA1-225ENST00000586385 LAMTOR5O43504 91 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 TBC1D4O60343 1298 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 ECI2O75521 394 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 B3GAT3O94766 335 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 RHOP08100 348 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 TDGF1P13385 188 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 LIG1P18858 919 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 MCM7P33993 719 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 NAMPTP43490 491 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 RBM25P49756 843 aaKnown RBP13.1□□□□□ -0.31
BRCA1-225ENST00000586385 MAPK6Q16659 721 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 UPP1Q16831 310 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 PRSS36Q5K4E3 855 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 VARS2Q5ST30 1063 aaKnown RBP13.1□□□□□ -0.31
BRCA1-225ENST00000586385 TANGO2Q6ICL3 276 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 PDXDC1Q6P996 788 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 TPRG1Q6ZUI0 275 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 CEP120Q8N960 986 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 TCEAL4Q96EI5 215 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 HINFPQ9BQA5 517 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 C2orf40Q9H1Z8 148 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 AVENQ9NQS1 362 aaPredicted RBP13.1□□□□□ -0.31
BRCA1-225ENST00000586385 PRMT8Q9NR22 394 aaPredicted RBP13.1□□□□□ -0.31
BRCA1-225ENST00000586385 PCDHGA2Q9Y5H1 932 aa13.1□□□□□ -0.31
BRCA1-225ENST00000586385 SMIM28A0A1B0GU29 152 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 SPTLC1O15269 473 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 ABLIM3O94929 683 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 SEC24AO95486 1093 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 RPA1P27694 616 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 CCR2P41597 374 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 PFKPQ01813 784 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 ROR1Q01973 937 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 XKR4Q5GH76 650 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 SLC8B1Q6J4K2 584 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 ALKAL1Q6UXT8 129 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
BRCA1-225ENST00000586385 NACC1Q96RE7 527 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 EPC1Q9H2F5 836 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 BRMS1Q9HCU9 246 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 HEBP1Q9NRV9 189 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 GDE1Q9NZC3 331 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 MRPS23Q9Y3D9 190 aaKnown RBP13.09□□□□□ -0.31
BRCA1-225ENST00000586385 SPTBN2O15020 2390 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 NCANO14594 1321 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 PATJQ8NI35 1801 aa13.09□□□□□ -0.31
BRCA1-225ENST00000586385 WDR27A2RRH5 827 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 ABLIM1O14639 778 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 MOSPD3O75425 235 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 RPS9P46781 194 aaKnown RBP13.08□□□□□ -0.32
BRCA1-225ENST00000586385 DCAF4L1Q3SXM0 396 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 RTL10Q7L3V2 364 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 TMEM130Q8N3G9 435 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 ZNF461Q8TAF7 563 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
BRCA1-225ENST00000586385 SMG5Q9UPR3 1016 aaKnown RBP13.08□□□□□ -0.32
BRCA1-225ENST00000586385 F5P12259 2224 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 ARHGEF35A5YM69 484 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 GRM5P41594 1212 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 MAGEA9P43362 315 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 GUCY1B3Q02153 619 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 MTAPQ13126 283 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 MRPL58Q14197 206 aaKnown RBP13.07□□□□□ -0.32
BRCA1-225ENST00000586385 GRM2Q14416 872 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 ZNF174Q15697 407 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 FAM78AQ5JUQ0 283 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms