RNA–Protein interactions for RNA: ENST00000585188.5

MPDU1-226, Transcript of mannose-P-dolichol utilization defect 1, human

TSL 3

Gene MPDU1, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MPDU1-226	ENST00000585188	SCNM1	Q9BWG6	230 aa		13.44	□□□□□ -0.26
MPDU1-226	ENST00000585188	TRIM6	Q9C030	488 aa	Predicted RBP	13.44	□□□□□ -0.26
MPDU1-226	ENST00000585188	RWDD1	Q9H446	243 aa	Predicted RBP	13.44	□□□□□ -0.26
MPDU1-226	ENST00000585188	MTRR	Q9UBK8	725 aa		13.44	□□□□□ -0.26
MPDU1-226	ENST00000585188	CDY1	Q9Y6F8	540 aa		13.44	□□□□□ -0.26
MPDU1-226	ENST00000585188	FLNB	O75369	2602 aa	Known RBP	13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	GOLGA8A	A7E2F4	631 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	GOLGA8B	A8MQT2	603 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	LAMA5	O15230	3695 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	B4GALT5	O43286	388 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	NPTXR	O95502	500 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	PTPN2	P17706	415 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	ADD1	P35611	737 aa	Known RBP	13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	PXN	P49023	591 aa	Predicted RBP	13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	USP11	P51784	963 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	MBTD1	Q05BQ5	628 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	LRRC32	Q14392	662 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	NAB2	Q15742	525 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	ETNPPL	Q8TBG4	499 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	GAB3	Q8WWW8	586 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	CEP170P1	Q96L14	293 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	CORO1B	Q9BR76	489 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	LSG1	Q9H089	658 aa	Known RBP	13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	PARP2	Q9UGN5	583 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	FREM2	Q5SZK8	3169 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	ZMYM2	Q9UBW7	1377 aa		13.43	□□□□□ -0.26
MPDU1-226	ENST00000585188	ITPR1	Q14643	2758 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	ARHGEF37	A1IGU5	675 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	SLC38A8	A6NNN8	435 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	C4orf47	A7E2U8	309 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	INO80B-WBP1	J3KQ70	363 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	ZNF263	O14978	683 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	EXTL3	O43909	919 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	MOSPD3	O75425	235 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	RPP40	O75818	363 aa	Known RBP	13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	TDP2	O95551	362 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	FGFR3	P22607	806 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	GNA11	P29992	359 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	MLLT6	P55198	1093 aa	Predicted RBP	13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	EMC2	Q15006	297 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188		Q4G0T1	1027 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	SH3PXD2A	Q5TCZ1	1133 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	CREB3L3	Q68CJ9	461 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	PKN3	Q6P5Z2	889 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	PDXDC1	Q6P996	788 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	CACNA2D4	Q7Z3S7	1137 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	HACE1	Q8IYU2	909 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	DEPDC1B	Q8WUY9	529 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	SMARCD2	Q92925	531 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	RSPRY1	Q96DX4	576 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	EDEM2	Q9BV94	578 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	XPNPEP1	Q9NQW7	623 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	PCDHGA5	Q9Y5G8	931 aa		13.42	□□□□□ -0.26
MPDU1-226	ENST00000585188	ASAP2	O43150	1006 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	MICAL2	O94851	1124 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	RFC5	P40937	340 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	QARS	P47897	775 aa	Known RBP	13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	SPIRE1	Q08AE8	756 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	ELAVL2	Q12926	359 aa	Known RBP	13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	CCIN	Q13939	588 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	NECTIN1	Q15223	517 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	MFSD6L	Q8IWD5	586 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	HS6ST3	Q8IZP7	471 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	TBCK	Q8TEA7	893 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	TCP11	Q8WWU5	503 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	DDX27	Q96GQ7	796 aa	Known RBP	13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	TRPV4	Q9HBA0	871 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	VPS45	Q9NRW7	570 aa		13.41	□□□□□ -0.26
MPDU1-226	ENST00000585188	KLF18	A0A0U1RQI7	1052 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	HEPACAM2	A8MVW5	462 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	ZBTB39	O15060	712 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	LRG1	P02750	347 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	GJA1	P17302	382 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	TKT	P29401	623 aa	Known RBP	13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	CTH	P32929	405 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	EXOSC10	Q01780	885 aa	Known RBP	13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	ROR1	Q01973	937 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	DGKK	Q5KSL6	1271 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	SLC27A1	Q6PCB7	646 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	CD300LG	Q6UXG3	332 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	ASAP3	Q8TDY4	903 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	ZC3H10	Q96K80	434 aa	Known RBP	13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	PPME1	Q9Y570	386 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	BACE2	Q9Y5Z0	518 aa		13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	ASH1L	Q9NR48	2969 aa	Known RBP	13.4	□□□□□ -0.26
MPDU1-226	ENST00000585188	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.39	□□□□□ -0.27
MPDU1-226	ENST00000585188		A0A1B0GUA9	196 aa		13.39	□□□□□ -0.27
MPDU1-226	ENST00000585188	MYBPHL	A2RUH7	354 aa		13.39	□□□□□ -0.27
MPDU1-226	ENST00000585188	SPECC1L-ADORA2A	F8WAN1	911 aa		13.39	□□□□□ -0.27
MPDU1-226	ENST00000585188	ZNF197	O14709	1029 aa		13.39	□□□□□ -0.27
MPDU1-226	ENST00000585188	ABLIM3	O94929	683 aa		13.39	□□□□□ -0.27
MPDU1-226	ENST00000585188	SEC24A	O95486	1093 aa		13.39	□□□□□ -0.27
MPDU1-226	ENST00000585188	CYP3A7	P24462	503 aa		13.39	□□□□□ -0.27
MPDU1-226	ENST00000585188	RBM25	P49756	843 aa	Known RBP	13.39	□□□□□ -0.27
MPDU1-226	ENST00000585188	NCBP1	Q09161	790 aa	Known RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms