RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CXCL16Q9H2A7 254 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 ARHGEF3Q9NR81 526 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 SLC38A7Q9NVC3 462 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 MYO15AQ9UKN7 3530 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 CA14Q9ULX7 337 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 FAM186AA6NE01 2351 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 SMIM28A0A1B0GU29 152 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 PRPHP41219 470 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 NPTX2P47972 431 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 CLCNKBP51801 687 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 PTGDRQ13258 359 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 FGF13Q92913 245 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 DRC1Q96MC2 740 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 MRPL4Q9BYD3 311 aaKnown RBP16.48■□□□□ 0.23
VAPA-209ENST00000585042 PTPRHQ9HD43 1115 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 AVENQ9NQS1 362 aaPredicted RBP16.48■□□□□ 0.23
VAPA-209ENST00000585042 DDX19AQ9NUU7 478 aaKnown RBP16.48■□□□□ 0.23
VAPA-209ENST00000585042 DLGAP2Q9P1A6 1054 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 USP20Q9Y2K6 914 aa16.48■□□□□ 0.23
VAPA-209ENST00000585042 ADAM12O43184 909 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 SEC24BO95487 1268 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 RPL9P32969 192 aaKnown RBP16.47■□□□□ 0.23
VAPA-209ENST00000585042 PFKPQ01813 784 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 PRKCQQ04759 706 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 DMP1Q13316 513 aaPredicted RBP16.47■□□□□ 0.23
VAPA-209ENST00000585042 KRT79Q5XKE5 535 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 PARM1Q6UWI2 310 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 CD300LGQ6UXG3 332 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 RSPO2Q6UXX9 243 aaPredicted RBP16.47■□□□□ 0.23
VAPA-209ENST00000585042 ZNF461Q8TAF7 563 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 SLC7A14Q8TBB6 771 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 SNX29Q8TEQ0 813 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 FGF14Q92915 247 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 SNX27Q96L92 541 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 KIFC3Q9BVG8 833 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 OSBPL6Q9BZF3 934 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 ARHGAP28Q9P2N2 729 aa16.47■□□□□ 0.23
VAPA-209ENST00000585042 VPS13AQ96RL7 3174 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 CCDC169A6NNP5 214 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 CCL16O15467 120 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 MCF2P10911 925 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 KCNE1P15382 129 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 TOB1P50616 345 aaPredicted RBP16.46■□□□□ 0.23
VAPA-209ENST00000585042 PEX3P56589 373 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 GPC5P78333 572 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 PABPC1LQ4VXU2 614 aaKnown RBP16.46■□□□□ 0.23
VAPA-209ENST00000585042 SLC8B1Q6J4K2 584 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 ADSSL1Q8N142 457 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 PJA1Q8NG27 643 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 ACAP3Q96P50 834 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 DDX23Q9BUQ8 820 aaKnown RBP16.46■□□□□ 0.23
VAPA-209ENST00000585042 GDE1Q9NZC3 331 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 DNMT3BQ9UBC3 853 aaKnown RBP16.46■□□□□ 0.23
VAPA-209ENST00000585042 MAFFQ9ULX9 164 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 POLIQ9UNA4 740 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 CDY1Q9Y6F8 540 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 VWA8A3KMH1 1905 aa16.46■□□□□ 0.23
VAPA-209ENST00000585042 DOCK6Q96HP0 2047 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 ARHGEF37A1IGU5 675 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 H7C4K7 107 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 SYN3O14994 580 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 ABLIM3O94929 683 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 PROZP22891 400 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 NTHL1P78549 312 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 ZNF568Q3ZCX4 644 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 GLRA4Q5JXX5 417 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 RINT1Q6NUQ1 792 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 ZC3H14Q6PJT7 736 aaKnown RBP16.45■□□□□ 0.22
VAPA-209ENST00000585042 DTHD1Q6ZMT9 781 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 C1orf186Q6ZWK4 172 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 C1orf210Q8IVY1 113 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 DAW1Q8N136 415 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 ITFG1Q8TB96 612 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 NELL2Q99435 816 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 RPP25Q9BUL9 199 aaKnown RBP16.45■□□□□ 0.22
VAPA-209ENST00000585042 CDT1Q9H211 546 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 POLD4Q9HCU8 107 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 KMT5AQ9NQR1 393 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
VAPA-209ENST00000585042 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.45■□□□□ 0.22
VAPA-209ENST00000585042 TRIP11Q15643 1979 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 KANSL1LA0AUZ9 987 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 E9PMD0 336 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 TBC1D4O60343 1298 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 HIP1RO75146 1068 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 MICAL2O94851 1124 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 LMNAP02545 664 aaKnown RBP16.44■□□□□ 0.22
VAPA-209ENST00000585042 DCNP07585 359 aaKnown RBP16.44■□□□□ 0.22
VAPA-209ENST00000585042 PTPN2P17706 415 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 GUCY2CP25092 1073 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 TKTP29401 623 aaKnown RBP16.44■□□□□ 0.22
VAPA-209ENST00000585042 ELF1P32519 619 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 MAGEA9P43362 315 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 MRPL58Q14197 206 aaKnown RBP16.44■□□□□ 0.22
VAPA-209ENST00000585042 SLC44A4Q53GD3 710 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 TPGS2Q68CL5 300 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 MPZL3Q6UWV2 235 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 SPIRE2Q8WWL2 714 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 TCHPQ9BT92 498 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 KCND2Q9NZV8 630 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms