RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 FAM186BQ8IYM0 893 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SYCE1Q8N0S2 351 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 USP38Q8NB14 1042 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■□□□□ 8
CDK5RAP3-236ENST00000584991 AKT3Q9Y243 479 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 FRMD4BQ9Y2L6 1034 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 TRIM17Q9Y577 477 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 NRCAMQ92823 1304 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 KPNA6O60684 536 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ADAMTS4O75173 837 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 FERP16591 822 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 PON1P27169 355 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ADSSP30520 456 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 PRMT2P55345 433 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 RPS6KA1Q15418 735 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CDCA2Q69YH5 1023 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 IQCKQ8N0W5 287 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 RDH13Q8NBN7 331 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ZSWIM2Q8NEG5 633 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 HSPBP1Q9NZL4 362 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 NENFQ9UMX5 172 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CCDC188H7C350 402 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 NCK2O43639 380 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 VTNP04004 478 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 INHAP05111 366 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CCDC172P0C7W6 258 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 MATR3P43243 847 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 LIG4P49917 911 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 EFNA5P52803 228 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 NKX3-2P78367 333 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 PTK2Q05397 1052 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CUL1Q13616 776 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 HIC1Q14526 733 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 DNAJC21Q5F1R6 531 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CXCL17Q6UXB2 119 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ZBTB8OSQ8IWT0 167 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 TMEM174Q8WUU8 243 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 PPP1R16BQ96T49 567 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 MTG1Q9BT17 334 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 C2orf40Q9H1Z8 148 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 RASSF4Q9H2L5 321 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 FEZ2Q9UHY8 353 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 NAGPAQ9UK23 515 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 PTCH2Q9Y6C5 1203 aa16.13■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ZEB2O60315 1214 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 EDN1P05305 212 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 GRK4P32298 578 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 JAM2P57087 298 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CLUL1Q15846 466 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SLFN11Q7Z7L1 901 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 KIAA0319LQ8IZA0 1049 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 XXYLT1Q8NBI6 393 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 VTI1AQ96AJ9 217 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 BORCS6Q96GS4 357 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CAPS2Q9BXY5 557 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CCDC113Q9H0I3 377 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 DDX20Q9UHI6 824 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SCN10AQ9Y5Y9 1956 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 HTTP42858 3142 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 GOLGA8IPA6NC78 632 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 GOLGA8JA6NMD2 632 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SRRM3A6NNA2 597 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 HEXIM1O94992 359 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 KIF4AO95239 1232 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 IRAK1P51617 712 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 PTENP60484 403 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SLC7A5Q01650 507 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 DCAF17Q5H9S7 520 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 TCERG1LQ5VWI1 586 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ALKBH5Q6P6C2 394 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 GSPT2Q8IYD1 628 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 C7orf31Q8N865 590 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SAAL1Q96ER3 474 aa16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 TARS2Q9BW92 718 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-236ENST00000584991 A0A087WZ62 844 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 MBLAC1A4D2B0 266 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 INO80B-WBP1J3KQ70 363 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 MSCO60682 206 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 PIGRP01833 764 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 PRKCBP05771 671 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 RFX1P22670 979 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 C1QTNF8P60827 252 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ZNF200P98182 395 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 PPP2R5EQ16537 467 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 MAPK6Q16659 721 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CFAP58Q5T655 872 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ZNF571Q7Z3V5 609 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 LRRC57Q8N9N7 239 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 KLHDC9Q8NEP7 349 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SLC35C1Q96A29 364 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 GDAP1L1Q96MZ0 367 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 FDXACB1Q9BRP7 624 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 INO80BQ9C086 356 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 FAM49AQ9H0Q0 323 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ISCUQ9H1K1 167 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 IFT122Q9HBG6 1241 aa16.11■□□□□ 0.17
CDK5RAP3-236ENST00000584991 EPB41L5Q9HCM4 733 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms