RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 CEBPBP17676 345 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 HOXA9P31269 272 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 QARSP47897 775 aaKnown RBP11.3□□□□□ -0.6
GGA3-219ENST00000584550 GRIK3Q13003 919 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 GAS6Q14393 721 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 ACAP1Q15027 740 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 Q4G0T1 1027 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 GALNT17Q6IS24 598 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 B3GNT9Q6UX72 402 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 HACE1Q8IYU2 909 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 FAM160A2Q8N612 972 aaPredicted RBP11.3□□□□□ -0.6
GGA3-219ENST00000584550 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 LLPHQ9BRT6 129 aaKnown RBP11.3□□□□□ -0.6
GGA3-219ENST00000584550 DHX33Q9H6R0 707 aaKnown RBP11.3□□□□□ -0.6
GGA3-219ENST00000584550 ZMIZ1Q9ULJ6 1067 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 TICRRQ7Z2Z1 1910 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 LAMA1P25391 3075 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 FAM208BQ5VWN6 2430 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 ARF4P18085 180 aaPredicted RBP11.29□□□□□ -0.6
GGA3-219ENST00000584550 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
GGA3-219ENST00000584550 CCNE1P24864 410 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 AXLP30530 894 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 GDI1P31150 447 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 KRT2P35908 639 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 RFC5P40937 340 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 SHC2P98077 582 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 EMC2Q15006 297 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 NPY5RQ15761 445 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 INF2Q27J81 1249 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 FAM78AQ5JUQ0 283 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 PIK3AP1Q6ZUJ8 805 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 CEP68Q76N32 757 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 TCP11Q8WWU5 503 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 PIK3R5Q8WYR1 880 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 DNASE1L2Q92874 299 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 TCEAL4Q96EI5 215 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 TMX3Q96JJ7 454 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 TRMT61BQ9BVS5 477 aaKnown RBP11.29□□□□□ -0.6
GGA3-219ENST00000584550 CXCL16Q9H2A7 254 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 ARRDC1-AS1Q9H2J1 176 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 ZFP14Q9HCL3 533 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 BRMS1Q9HCU9 246 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 RBM12Q9NTZ6 932 aaKnown RBP11.29□□□□□ -0.6
GGA3-219ENST00000584550 GDE1Q9NZC3 331 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 CDY1Q9Y6F8 540 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 PIAS3Q9Y6X2 628 aa11.29□□□□□ -0.6
GGA3-219ENST00000584550 CNOT1A5YKK6 2376 aaKnown RBP11.28□□□□□ -0.6
GGA3-219ENST00000584550 CEP295Q9C0D2 2601 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 ASAP2O43150 1006 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 CHRNB1P11230 501 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 PTPN2P17706 415 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 FCARP24071 287 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 YWHABP31946 246 aaKnown RBP11.28□□□□□ -0.6
GGA3-219ENST00000584550 MCM2P49736 904 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 PTENP60484 403 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 HMGN5P82970 282 aaKnown RBP11.28□□□□□ -0.6
GGA3-219ENST00000584550 MBTD1Q05BQ5 628 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 NR5A1Q13285 461 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 TUSC3Q13454 348 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 RAB33AQ14088 237 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 UVSSAQ2YD98 709 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 XKR9Q5GH70 373 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 MAMSTRQ6ZN01 415 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 LONP2Q86WA8 852 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 EXOC8Q8IYI6 725 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 FAM177A1Q8N128 213 aaPredicted RBP11.28□□□□□ -0.6
GGA3-219ENST00000584550 C12orf50Q8NA57 414 aaPredicted RBP11.28□□□□□ -0.6
GGA3-219ENST00000584550 ETNPPLQ8TBG4 499 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 IRF7Q92985 503 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 CCDC51Q96ER9 411 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 C8orf76Q96K31 380 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 ZSWIM3Q96MP5 696 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 MTRQ99707 1265 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 CORO1BQ9BR76 489 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 SMOC1Q9H4F8 434 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 ZNF334Q9HCZ1 680 aaPredicted RBP11.28□□□□□ -0.6
GGA3-219ENST00000584550 C2orf42Q9NWW7 574 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 VWA8A3KMH1 1905 aa11.28□□□□□ -0.6
GGA3-219ENST00000584550 CYP3A7-CYP3A51PA0A087WV96 503 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 BTBD18B2RXH4 712 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 M0R2N6 131 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 TM4SF5O14894 197 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 SLC37A4O43826 429 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 KCNK5O95279 499 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 P4HBP07237 508 aaKnown RBP11.27□□□□□ -0.61
GGA3-219ENST00000584550 CYP3A7P24462 503 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 VIPR2P41587 438 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 CTTNQ14247 550 aaKnown RBP11.27□□□□□ -0.61
GGA3-219ENST00000584550 SAFBQ15424 915 aaKnown RBP eCLIP11.27□□□□□ -0.61
GGA3-219ENST00000584550 AMHR2Q16671 573 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
GGA3-219ENST00000584550 STPG1Q5TH74 334 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 SLC27A1Q6PCB7 646 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 VITQ6UXI7 678 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 Q6ZS52 159 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms