RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 GPR65Q8IYL9 337 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 RIPOR3Q96MK2 946 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 NECTIN4Q96NY8 510 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 FIZ1Q96SL8 496 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 TTPALQ9BTX7 342 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 HAPLN2Q9GZV7 340 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 SFXN1Q9H9B4 322 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 CNTN3Q9P232 1028 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 LOC730098B7Z3J9 87 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 TMEM189-UBE2V1I3L0A0 370 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 PIGRP01833 764 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 CLTAP09496 248 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 MYBP10242 640 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 IDEP14735 1019 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 GAP43P17677 238 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 RPL17P18621 184 aaKnown RBP22.29■■□□□ 1.16
SS18-224ENST00000584083 GTF2BQ00403 316 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 SOX4Q06945 474 aaPredicted RBP22.29■■□□□ 1.16
SS18-224ENST00000584083 UPP1Q16831 310 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 RTP2Q5QGT7 225 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 ATAT1Q5SQI0 421 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 RNF135Q8IUD6 432 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 DDX27Q96GQ7 796 aaKnown RBP22.29■■□□□ 1.16
SS18-224ENST00000584083 MRPL44Q9H9J2 332 aaKnown RBP22.29■■□□□ 1.16
SS18-224ENST00000584083 MAN1C1Q9NR34 630 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 TSHZ2Q9NRE2 1034 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 FNIP2Q9P278 1114 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 SEL1LQ9UBV2 794 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 DPP7Q9UHL4 492 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 VWA8A3KMH1 1905 aa22.29■■□□□ 1.16
SS18-224ENST00000584083 DCXO43602 365 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 TRAPPC3O43617 180 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 SPATA31D3P0C874 917 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 CXCL8P10145 99 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 SP100P23497 879 aaPredicted RBP22.28■■□□□ 1.16
SS18-224ENST00000584083 KYAT1Q16773 422 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 ATL3Q6DD88 541 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 SPATA31D4Q6ZUB0 917 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 KCNG4Q8TDN1 519 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 C18orf25Q96B23 403 aaPredicted RBP22.28■■□□□ 1.16
SS18-224ENST00000584083 DNAJC19Q96DA6 116 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 MSTO1Q9BUK6 570 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 ST6GALNAC4Q9H4F1 302 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 POMKQ9H5K3 350 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 TBC1D7Q9P0N9 293 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 CFAP45Q9UL16 551 aa22.28■■□□□ 1.16
SS18-224ENST00000584083 OGTO15294 1046 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 MEFVO15553 781 aaPredicted RBP22.27■■□□□ 1.16
SS18-224ENST00000584083 IGFBP6P24592 240 aaPredicted RBP22.27■■□□□ 1.16
SS18-224ENST00000584083 TNFSF9P41273 254 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 ME1P48163 572 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 PSMD5Q16401 504 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 PDXDC1Q6P996 788 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.27■■□□□ 1.16
SS18-224ENST00000584083 ZNF720Q7Z2F6 126 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 MAP4K3Q8IVH8 894 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 PIK3R5Q8WYR1 880 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 STAMQ92783 540 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 PLEKHA5Q9HAU0 1116 aa22.27■■□□□ 1.16
SS18-224ENST00000584083 A0A0B4J269 797 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 I3L4J1 428 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 PODXLO00592 558 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 RPL9P32969 192 aaKnown RBP22.26■■□□□ 1.15
SS18-224ENST00000584083 DNM1Q05193 864 aaKnown RBP22.26■■□□□ 1.15
SS18-224ENST00000584083 SPAG1Q07617 926 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 HERC4Q5GLZ8 1057 aaPredicted RBP22.26■■□□□ 1.15
SS18-224ENST00000584083 SLC39A4Q6P5W5 647 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 SHC4Q6S5L8 630 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 C3orf58Q8NDZ4 430 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 LNX1Q8TBB1 728 aaPredicted RBP22.26■■□□□ 1.15
SS18-224ENST00000584083 DHX58Q96C10 678 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 HVCN1Q96D96 273 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 RPF1Q9H9Y2 349 aaKnown RBP22.26■■□□□ 1.15
SS18-224ENST00000584083 PANK4Q9NVE7 773 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 MUTYHQ9UIF7 546 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 NR2E1Q9Y466 385 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 C2orf16Q68DN1 1984 aa22.26■■□□□ 1.15
SS18-224ENST00000584083 TTC26A0AVF1 554 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 ANKRD63C9JTQ0 380 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 TGM5O43548 720 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 GCNT3O95395 438 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 FGFR3P22607 806 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 BRCC3P46736 316 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 PPP2R3AQ06190 1150 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 ZBTB41Q5SVQ8 909 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 SLFN12LQ6IEE8 588 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 CD300LGQ6UXG3 332 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 GPR149Q86SP6 731 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 IQUBQ8NA54 791 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 FAM212AQ96EL1 285 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 KIF12Q96FN5 646 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 LRRC27Q9C0I9 530 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 NUB1Q9Y5A7 615 aa22.25■■□□□ 1.15
SS18-224ENST00000584083 CCDC195A0A1B0GUA6 201 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 FAM86C2PA6NEL3 165 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 LACTBL1A8MY62 500 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 ENOX2Q16206 610 aaKnown RBP22.24■■□□□ 1.15
SS18-224ENST00000584083 TMEM31Q5JXX7 168 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 AXDND1Q5T1B0 1012 aaPredicted RBP22.24■■□□□ 1.15
SS18-224ENST00000584083 ADALQ6DHV7 355 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms