RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 CXCL16Q9H2A7 254 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 PLEKHA4Q9H4M7 779 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 SFXN1Q9H9B4 322 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 OLFML3Q9NRN5 406 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 STYXL1Q9Y6J8 313 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 A0A0B4J269 797 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 TTC26A0AVF1 554 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 CASTOR2A6NHX0 329 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 MYMKA6NI61 221 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 K7ENM7 598 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 HNRNPDLO14979 420 aaKnown RBP10.81□□□□□ -0.68
SKA2-208ENST00000583927 OGTO15294 1046 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 DCXO43602 365 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 TRAPPC3O43617 180 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 CUTAO60888 179 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 PPP1R37O75864 691 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 KRT18P05783 430 aaKnown RBP10.81□□□□□ -0.68
SKA2-208ENST00000583927 CLTAP09496 248 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 EPCAMP16422 314 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 CA8P35219 290 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 DHX8Q14562 1220 aaKnown RBP10.81□□□□□ -0.68
SKA2-208ENST00000583927 SLC10A6Q3KNW5 377 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 CNNM4Q6P4Q7 775 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 LILRA6Q6PI73 481 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 POTEHQ6S545 545 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.81□□□□□ -0.68
SKA2-208ENST00000583927 RTL10Q7L3V2 364 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 ZNF720Q7Z2F6 126 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 KHSRPQ92945 711 aaKnown RBP eCLIP10.81□□□□□ -0.689e-7■■■■□ 21.9
SKA2-208ENST00000583927 ZMAT2Q96NC0 199 aaKnown RBP10.81□□□□□ -0.68
SKA2-208ENST00000583927 HAPLN2Q9GZV7 340 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 TNMDQ9H2S6 317 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 KBTBD4Q9NVX7 518 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 CFAP45Q9UL16 551 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 USTQ9Y2C2 406 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 NR2E1Q9Y466 385 aa10.81□□□□□ -0.68
SKA2-208ENST00000583927 TSC2P49815 1807 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 A0A087X0B3 334 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 MEFVO15553 781 aaPredicted RBP10.8□□□□□ -0.68
SKA2-208ENST00000583927 B3GAT3O94766 335 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 GLUD1P00367 558 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 CYP3A5P20815 502 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 FGFR3P22607 806 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 STAT6P42226 847 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 LIG4P49917 911 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 CLCNKBP51801 687 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 SOX4Q06945 474 aaPredicted RBP10.8□□□□□ -0.68
SKA2-208ENST00000583927 ALCAMQ13740 583 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 ZBTB6Q15916 424 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 E2F4Q16254 413 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 ATAT1Q5SQI0 421 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 AXDND1Q5T1B0 1012 aaPredicted RBP10.8□□□□□ -0.68
SKA2-208ENST00000583927 FAM171A1Q5VUB5 890 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 SLFN12LQ6IEE8 588 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 SLC39A4Q6P5W5 647 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 CD300LGQ6UXG3 332 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 GPR149Q86SP6 731 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 ZBTB33Q86T24 672 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 CD302Q8IX05 232 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 LNX1Q8TBB1 728 aaPredicted RBP10.8□□□□□ -0.68
SKA2-208ENST00000583927 BICD1Q96G01 975 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 LRRC27Q9C0I9 530 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 EPHX3Q9H6B9 360 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 MAGEF1Q9HAY2 307 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 ANKFY1Q9P2R3 1169 aa10.8□□□□□ -0.68
SKA2-208ENST00000583927 TFIP11Q9UBB9 837 aaKnown RBP10.8□□□□□ -0.68
SKA2-208ENST00000583927 C2CD2LO14523 706 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 SYN3O14994 580 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 XPOTO43592 962 aaKnown RBP10.79□□□□□ -0.68
SKA2-208ENST00000583927 POU2F2P09086 479 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 PAX3P23760 479 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 NMT1P30419 496 aaKnown RBP10.79□□□□□ -0.68
SKA2-208ENST00000583927 LRPAP1P30533 357 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 POSTNQ15063 836 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 GLRA4Q5JXX5 417 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 RTP2Q5QGT7 225 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 RARS2Q5T160 578 aaKnown RBP10.79□□□□□ -0.68
SKA2-208ENST00000583927 SFR1Q86XK3 245 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 RNF135Q8IUD6 432 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 C3orf58Q8NDZ4 430 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 RIN2Q8WYP3 895 aaPredicted RBP10.79□□□□□ -0.68
SKA2-208ENST00000583927 CLSTN3Q9BQT9 956 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 PYM1Q9BRP8 204 aaKnown RBP10.79□□□□□ -0.68
SKA2-208ENST00000583927 POMKQ9H5K3 350 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 C11orf16Q9NQ32 467 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 MAN1C1Q9NR34 630 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 ZDHHC7Q9NXF8 308 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 MTRRQ9UBK8 725 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 CACNG4Q9UBN1 327 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 CPSF3Q9UKF6 684 aaKnown RBP10.79□□□□□ -0.68
SKA2-208ENST00000583927 RCOR1Q9UKL0 485 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 DERAQ9Y315 318 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 PCDHB13Q9Y5F0 798 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 BACE2Q9Y5Z0 518 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 ZDBF2Q9HCK1 2354 aa10.79□□□□□ -0.68
SKA2-208ENST00000583927 DENND4CQ5VZ89 1909 aa10.78□□□□□ -0.68
SKA2-208ENST00000583927 PODXLO00592 558 aa10.78□□□□□ -0.68
SKA2-208ENST00000583927 TGM5O43548 720 aa10.78□□□□□ -0.68
SKA2-208ENST00000583927 CXCL8P10145 99 aa10.78□□□□□ -0.68
SKA2-208ENST00000583927 HOXA9P31269 272 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms