RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ZNF529Q6P280 563 aa7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 CCDC149Q6ZUS6 474 aa7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 UBE3BQ7Z3V4 1068 aa7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 COL23A1Q86Y22 540 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 PLXDC1Q8IUK5 500 aa7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 BORCS6Q96GS4 357 aa7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 C11orf54Q9H0W9 315 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 SPON1Q9HCB6 807 aa7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 PNPOQ9NVS9 261 aa7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 FAM50BQ9Y247 325 aa7.09□□□□□ -1.27
SMARCE1-219ENST00000583294 B5MCH6 92 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 GRM6O15303 877 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 SBK3P0C264 359 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 PLS1Q14651 629 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 FLYWCH1Q4VC44 716 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 OTUD7BQ6GQQ9 843 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 GGNQ86UU5 652 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 FAM83AQ86UY5 434 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 RNF169Q8NCN4 708 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 FAM156AQ8NDB6 213 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 TFAP2CQ92754 450 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 SLC35A4Q96G79 324 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 NT5C1BQ96P26 610 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 SSBP3Q9BWW4 388 aaPredicted RBP7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 TMEM60Q9H2L4 133 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 PCDHA1Q9Y5I3 950 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 SLC30A1Q9Y6M5 507 aa7.08□□□□□ -1.28
SMARCE1-219ENST00000583294 PNPLA7Q6ZV29 1317 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 TBKBP1A7MCY6 615 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 PRR5-ARHGAP8B1AHC4 643 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 F2RL2O00254 374 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 TPP1O14773 563 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 MFAP3LO75121 409 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 ARIH2O95376 493 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 SNRPA1P09661 255 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 TYRP14679 529 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 HK1P19367 917 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 CLRN1P58418 232 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 NKX6-1P78426 367 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 ATP2B3Q16720 1220 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 BMT2Q1RMZ1 405 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 MAP9Q49MG5 647 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 ANO6Q4KMQ2 910 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 DBX2Q6ZNG2 339 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 CHST15Q7LFX5 561 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 POLNQ7Z5Q5 900 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 APBB1IPQ7Z5R6 666 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 SGMS1Q86VZ5 419 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 ST8SIA2Q92186 375 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 MPHOSPH9Q99550 1183 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 ARNT2Q9HBZ2 717 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 SLAMF7Q9NQ25 335 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 HECAQ9UBI9 543 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 FEZ2Q9UHY8 353 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 CPA4Q9UI42 421 aa7.07□□□□□ -1.28
SMARCE1-219ENST00000583294 CAPN14A8MX76 684 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 FAM227AF5H4B4 570 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 PJA2O43164 708 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 ADRB1P08588 477 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 IL12RB1P42701 662 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 AGFG1P52594 562 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 RAB1AP62820 205 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 HLTFQ14527 1009 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 CSRP2Q16527 193 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 KIAA0753Q2KHM9 967 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 COBLL1Q53SF7 1204 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 SEM1Q6ZVN7 128 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 DOK3Q7L591 496 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 SRGAP1Q7Z6B7 1085 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 KIAA0319LQ8IZA0 1049 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 PHACTR3Q96KR7 559 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 RBM15Q96T37 977 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 C1orf43Q9BWL3 253 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 CPEB1Q9BZB8 566 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 POGKQ9P215 609 aa7.06□□□□□ -1.28
SMARCE1-219ENST00000583294 A0A088AWK7 358 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 CCDC194A0A1B0GVG4 234 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 CAPN8A6NHC0 703 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 NT5C1B-RDH14C9J2C7 533 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 ZNF623O75123 536 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 IPO13O94829 963 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 MAP4K4O95819 1239 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 ZBED1O96006 694 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 ITGB3P05106 788 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 MYL1P05976 194 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 RHCEP18577 417 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 PHKA1P46020 1223 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 RHDQ02161 417 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 HHEXQ03014 270 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 EFEMP1Q12805 493 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 FGL2Q14314 439 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 ICAM4Q14773 271 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 PABPC1LQ4VXU2 614 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 ATXN7L2Q5T6C5 722 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 SPTY2D1Q68D10 685 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 CYB5RLQ6IPT4 315 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 SWSAP1Q6NVH7 229 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 EFCAB12Q6NXP0 572 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 GSPT2Q8IYD1 628 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 ZNF808Q8N4W9 903 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms