RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ENTPD4	Q9Y227	616 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	FAN1	Q9Y2M0	1017 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	GTF3C3	Q9Y5Q9	886 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	SMIM35	A0A1B0GVV1	85 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	WDR27	A2RRH5	827 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	GOLGA8CP	A6NN73	597 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	NOP56	O00567	594 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	TRDMT1	O14717	391 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	AP5Z1	O43299	807 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	CER1	O95813	267 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	PRKCG	P05129	697 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	TMEM62	Q0P6H9	643 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	GRSF1	Q12849	480 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	UVSSA	Q2YD98	709 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	PPM1L	Q5SGD2	360 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	HES3	Q5TGS1	186 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	METTL7B	Q6UX53	244 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	FAM228A	Q86W67	206 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	DCBLD1	Q8N8Z6	715 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	MDGA1	Q8NFP4	955 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	YTHDC1	Q96MU7	727 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	TMEM175	Q9BSA9	504 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	FAM49A	Q9H0Q0	323 aa	Predicted RBP	5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	TMEM245	Q9H330	911 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	MLXIP	Q9HAP2	919 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	PIH1D3	Q9NQM4	214 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	DNAJB4	Q9UDY4	337 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	SUSD2	Q9UGT4	822 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	TUBD1	Q9UJT1	453 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	PCDHA2	Q9Y5H9	948 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	EVPL	Q92817	2033 aa		5.77	□□□□□ -1.49
MSI2-216	ENST00000582772	ZFC3H1	O60293	1989 aa	Known RBP	5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	FAM221A	A4D161	298 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	RRN3P2	A6NIE6	340 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	CCL16	O15467	120 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	TTLL1	O95922	423 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	RHO	P08100	348 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	SKI	P12755	728 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	DRD1	P21728	446 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	SLC1A4	P43007	532 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	GRK6	P43250	576 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	SNAP25	P60880	206 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	IK	Q13123	557 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	BYSL	Q13895	437 aa	Known RBP	5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	CNGB1	Q14028	1251 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	MAP7D1	Q3KQU3	841 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	BTNL9	Q6UXG8	535 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	KANSL1	Q7Z3B3	1105 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	PRIMA1	Q86XR5	153 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	MCEMP1	Q8IX19	187 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	CHFR	Q96EP1	664 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	CCDC97	Q96F63	343 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	5.76	□□□□□ -1.49	6e-7	■■■□□ 16.8
MSI2-216	ENST00000582772	UNK	Q9C0B0	810 aa	Known RBP	5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	FAM124B	Q9H5Z6	455 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	ASCL3	Q9NQ33	180 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	ATP8A2	Q9NTI2	1148 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	MARCH5	Q9NX47	278 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	MTMR4	Q9NYA4	1195 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	GMIP	Q9P107	970 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	COL20A1	Q9P218	1284 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	BTBD3	Q9Y2F9	522 aa		5.76	□□□□□ -1.49
MSI2-216	ENST00000582772	ZBED9	Q6R2W3	1325 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	HEATR9	A2RTY3	570 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	CILP	O75339	1184 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	RFPL3	O75679	317 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	NR3C2	P08235	984 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	CD1E	P15812	388 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	UQCRFS1	P47985	274 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	ZNF33A	Q06730	810 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	KIZ	Q2M2Z5	673 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	PLEKHG6	Q3KR16	790 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	GORAB	Q5T7V8	394 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	ANO7	Q6IWH7	933 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	RCSD1	Q6JBY9	416 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	IL27RA	Q6UWB1	636 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	TAS1R1	Q7RTX1	841 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	C12orf40	Q86WS4	652 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	PTRH1	Q86Y79	214 aa	Known RBP	5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	GALNT11	Q8NCW6	608 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	RPLP0P6	Q8NHW5	317 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	SDR42E1	Q8WUS8	393 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	SGF29	Q96ES7	293 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	CEP95	Q96GE4	821 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	PRIMPOL	Q96LW4	560 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	RMDN3	Q96TC7	470 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	TRAIP	Q9BWF2	469 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	GTSE1	Q9NYZ3	720 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	ITGB1BP2	Q9UKP3	347 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	FNDC3A	Q9Y2H6	1198 aa	Known RBP	5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	ARID2	Q68CP9	1835 aa		5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	PRRC2C	Q9Y520	2896 aa	Known RBP	5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	ZNF106	Q9H2Y7	1883 aa	Known RBP	5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	TP53BP1	Q12888	1972 aa	Predicted RBP	5.75	□□□□□ -1.49
MSI2-216	ENST00000582772	KNL1	Q8NG31	2342 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	MAP1A	P78559	2803 aa	Predicted RBP	5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	MAGEB6P1	A0A0J9YX57	407 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	HEPACAM2	A8MVW5	462 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms